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Update Nonpareil to latest, add native MultiQC support, update output docs, fix MultiQC methods section #1773

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Update Nonpareil to latest, add native MultiQC support, update output docs, fix MultiQC methods section

Update Nonpareil to latest, add native MultiQC support, update output docs, fix MultiQC methods section #1773

Run time

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Job Run time
Run pipeline with test data (23.04.0, test)
13m 45s
Run pipeline with test data (23.04.0, test)
13m 45s
Run pipeline with test data (23.04.0, test_nopreprocessing)
14m 42s
Run pipeline with test data (23.04.0, test_nopreprocessing)
14m 42s
Run pipeline with test data (23.04.0, test_noprofiling)
7m 11s
Run pipeline with test data (23.04.0, test_noprofiling)
7m 11s
Run pipeline with test data (23.04.0, test_krakenuniq)
8m 9s
Run pipeline with test data (23.04.0, test_krakenuniq)
8m 9s
Run pipeline with test data (23.04.0, test_malt)
5m 51s
Run pipeline with test data (23.04.0, test_malt)
5m 51s
Run pipeline with test data (23.04.0, test_motus)
24m 43s
Run pipeline with test data (23.04.0, test_motus)
24m 43s
Run pipeline with test data (23.04.0, test_falco)
5m 18s
Run pipeline with test data (23.04.0, test_falco)
5m 18s
Run pipeline with test data (23.04.0, test_fastp)
10m 30s
Run pipeline with test data (23.04.0, test_fastp)
10m 30s
Run pipeline with test data (23.04.0, test_adapterremoval)
10m 14s
Run pipeline with test data (23.04.0, test_adapterremoval)
10m 14s
Run pipeline with test data (23.04.0, test_bbduk)
10m 36s
Run pipeline with test data (23.04.0, test_bbduk)
10m 36s
Run pipeline with test data (23.04.0, test_prinseqplusplus)
9m 0s
Run pipeline with test data (23.04.0, test_prinseqplusplus)
9m 0s
Run pipeline with test data (latest-everything, test)
14m 58s
Run pipeline with test data (latest-everything, test)
14m 58s
Run pipeline with test data (latest-everything, test_nopreprocessing)
2m 42s
Run pipeline with test data (latest-everything, test_nopreprocessing)
15m 38s
Run pipeline with test data (latest-everything, test_noprofiling)
8m 12s
Run pipeline with test data (latest-everything, test_noprofiling)
8m 12s
Run pipeline with test data (latest-everything, test_krakenuniq)
9m 53s
Run pipeline with test data (latest-everything, test_krakenuniq)
9m 53s
Run pipeline with test data (latest-everything, test_malt)
4m 39s
Run pipeline with test data (latest-everything, test_malt)
9m 6s
Run pipeline with test data (latest-everything, test_motus)
26m 21s
Run pipeline with test data (latest-everything, test_motus)
26m 21s
Run pipeline with test data (latest-everything, test_falco)
6m 42s
Run pipeline with test data (latest-everything, test_falco)
6m 42s
Run pipeline with test data (latest-everything, test_fastp)
9m 33s
Run pipeline with test data (latest-everything, test_fastp)
9m 33s
Run pipeline with test data (latest-everything, test_adapterremoval)
10m 24s
Run pipeline with test data (latest-everything, test_adapterremoval)
10m 24s
Run pipeline with test data (latest-everything, test_bbduk)
9m 37s
Run pipeline with test data (latest-everything, test_bbduk)
9m 37s
Run pipeline with test data (latest-everything, test_prinseqplusplus)
10m 3s
Run pipeline with test data (latest-everything, test_prinseqplusplus)
10m 3s
8h 3m 29s