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Fix nanopore fasta input being incorrectly channeled #1779

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Fix nanopore fasta input being incorrectly channeled

Fix nanopore fasta input being incorrectly channeled #1779

Run time

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Job Run time
Run pipeline with test data (23.04.0, test)
14m 17s
Run pipeline with test data (23.04.0, test_nopreprocessing)
15m 47s
Run pipeline with test data (23.04.0, test_noprofiling)
8m 33s
Run pipeline with test data (23.04.0, test_krakenuniq)
9m 54s
Run pipeline with test data (23.04.0, test_malt)
6m 14s
Run pipeline with test data (23.04.0, test_motus)
15m 50s
Run pipeline with test data (23.04.0, test_falco)
5m 45s
Run pipeline with test data (23.04.0, test_fastp)
9m 13s
Run pipeline with test data (23.04.0, test_adapterremoval)
11m 21s
Run pipeline with test data (23.04.0, test_bbduk)
10m 13s
Run pipeline with test data (23.04.0, test_prinseqplusplus)
12m 9s
Run pipeline with test data (latest-everything, test)
13m 49s
Run pipeline with test data (latest-everything, test_nopreprocessing)
14m 36s
Run pipeline with test data (latest-everything, test_noprofiling)
7m 58s
Run pipeline with test data (latest-everything, test_krakenuniq)
9m 58s
Run pipeline with test data (latest-everything, test_malt)
6m 31s
Run pipeline with test data (latest-everything, test_motus)
16m 42s
Run pipeline with test data (latest-everything, test_falco)
5m 36s
Run pipeline with test data (latest-everything, test_fastp)
10m 29s
Run pipeline with test data (latest-everything, test_adapterremoval)
11m 49s
Run pipeline with test data (latest-everything, test_bbduk)
9m 59s
Run pipeline with test data (latest-everything, test_prinseqplusplus)
9m 18s
3h 56m 1s