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Update tubemap to add missing tools and fix bug around samtools stats #1823

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Update tubemap to add missing tools and fix bug around samtools stats

Update tubemap to add missing tools and fix bug around samtools stats #1823

Run time

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Job Run time
Run pipeline with test data (23.04.0, test)
16m 41s
Run pipeline with test data (23.04.0, test_nopreprocessing)
23m 35s
Run pipeline with test data (23.04.0, test_noprofiling)
8m 58s
Run pipeline with test data (23.04.0, test_krakenuniq)
10m 53s
Run pipeline with test data (23.04.0, test_malt)
7m 34s
Run pipeline with test data (23.04.0, test_motus)
36m 51s
Run pipeline with test data (23.04.0, test_falco)
6m 50s
Run pipeline with test data (23.04.0, test_fastp)
10m 16s
Run pipeline with test data (23.04.0, test_adapterremoval)
12m 19s
Run pipeline with test data (23.04.0, test_bbduk)
11m 33s
Run pipeline with test data (23.04.0, test_prinseqplusplus)
10m 45s
Run pipeline with test data (latest-everything, test)
20m 9s
Run pipeline with test data (latest-everything, test_nopreprocessing)
17m 27s
Run pipeline with test data (latest-everything, test_noprofiling)
7m 42s
Run pipeline with test data (latest-everything, test_krakenuniq)
9m 7s
Run pipeline with test data (latest-everything, test_malt)
6m 49s
Run pipeline with test data (latest-everything, test_motus)
27m 10s
Run pipeline with test data (latest-everything, test_falco)
5m 45s
Run pipeline with test data (latest-everything, test_fastp)
11m 35s
Run pipeline with test data (latest-everything, test_adapterremoval)
12m 32s
Run pipeline with test data (latest-everything, test_bbduk)
12m 9s
Run pipeline with test data (latest-everything, test_prinseqplusplus)
9m 58s
4h 56m 38s