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Merge pull request #347 from nf-core/tutorial-fixes #1156

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Merge pull request #347 from nf-core/tutorial-fixes

Merge pull request #347 from nf-core/tutorial-fixes #1156

Triggered via push August 10, 2023 15:11
@jfy133jfy133
pushed 81396bb
dev
Status Success
Total duration 2h 10m 26s
Artifacts –

ci.yml

on: push
Matrix: Test KrakenUniq with workflow parameters
Matrix: Test MALT with workflow parameters
Matrix: Test mOTUs with workflow parameters
Matrix: Run pipeline with test data
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16 warnings
Test MALT with workflow parameters (23.04.0)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test KrakenUniq with workflow parameters (latest-everything)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test KrakenUniq with workflow parameters (23.04.0)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test MALT with workflow parameters (latest-everything)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (latest-everything, --shortread_qc_tool fastp)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (latest-everything, --preprocessing_qc_tool falco)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (23.04.0, --shortread_complexityfilter_tool bbduk)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (latest-everything, --shortread_complexityfilter_tool bbduk)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (latest-everything, --shortread_complexityfilter_tool prinseqplusplus)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (23.04.0, --shortread_complexityfilter_tool prinseqplusplus)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (latest-everything, --shortread_qc_tool adapterremoval)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (23.04.0, --shortread_qc_tool fastp)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (23.04.0, --preprocessing_qc_tool falco)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (23.04.0, --shortread_qc_tool adapterremoval)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test mOTUs with workflow parameters (latest-everything)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test mOTUs with workflow parameters (23.04.0)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/