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Add flag to publish intermediate bracken files #1711

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Add flag to publish intermediate bracken files

Add flag to publish intermediate bracken files #1711

Run time

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Job Run time
Run pipeline with test data (23.04.0, test)
5m 20s
Run pipeline with test data (23.04.0, test)
16m 36s
Run pipeline with test data (23.04.0, test)
16m 36s
Run pipeline with test data (23.04.0, test_nopreprocessing)
15m 46s
Run pipeline with test data (23.04.0, test_nopreprocessing)
15m 46s
Run pipeline with test data (23.04.0, test_nopreprocessing)
15m 46s
Run pipeline with test data (23.04.0, test_noprofiling)
7m 21s
Run pipeline with test data (23.04.0, test_noprofiling)
7m 21s
Run pipeline with test data (23.04.0, test_noprofiling)
7m 21s
Run pipeline with test data (23.04.0, test_krakenuniq)
9m 21s
Run pipeline with test data (23.04.0, test_krakenuniq)
9m 21s
Run pipeline with test data (23.04.0, test_krakenuniq)
9m 21s
Run pipeline with test data (23.04.0, test_malt)
6m 35s
Run pipeline with test data (23.04.0, test_malt)
6m 35s
Run pipeline with test data (23.04.0, test_malt)
6m 35s
Run pipeline with test data (23.04.0, test_motus)
24m 15s
Run pipeline with test data (23.04.0, test_motus)
24m 15s
Run pipeline with test data (23.04.0, test_motus)
24m 15s
Run pipeline with test data (23.04.0, test_falco)
6m 59s
Run pipeline with test data (23.04.0, test_falco)
6m 59s
Run pipeline with test data (23.04.0, test_falco)
6m 59s
Run pipeline with test data (23.04.0, test_fastp)
10m 28s
Run pipeline with test data (23.04.0, test_fastp)
10m 28s
Run pipeline with test data (23.04.0, test_fastp)
10m 28s
Run pipeline with test data (23.04.0, test_adapterremoval)
13m 2s
Run pipeline with test data (23.04.0, test_adapterremoval)
13m 2s
Run pipeline with test data (23.04.0, test_adapterremoval)
13m 2s
Run pipeline with test data (23.04.0, test_bbduk)
11m 29s
Run pipeline with test data (23.04.0, test_bbduk)
11m 29s
Run pipeline with test data (23.04.0, test_bbduk)
11m 29s
Run pipeline with test data (23.04.0, test_prinseqplusplus)
10m 59s
Run pipeline with test data (23.04.0, test_prinseqplusplus)
10m 59s
Run pipeline with test data (23.04.0, test_prinseqplusplus)
10m 59s
Run pipeline with test data (latest-everything, test)
15m 49s
Run pipeline with test data (latest-everything, test)
15m 49s
Run pipeline with test data (latest-everything, test)
15m 49s
Run pipeline with test data (latest-everything, test_nopreprocessing)
4m 11s
Run pipeline with test data (latest-everything, test_nopreprocessing)
4m 27s
Run pipeline with test data (latest-everything, test_nopreprocessing)
14m 27s
Run pipeline with test data (latest-everything, test_noprofiling)
8m 46s
Run pipeline with test data (latest-everything, test_noprofiling)
8m 46s
Run pipeline with test data (latest-everything, test_noprofiling)
8m 46s
Run pipeline with test data (latest-everything, test_krakenuniq)
10m 57s
Run pipeline with test data (latest-everything, test_krakenuniq)
10m 57s
Run pipeline with test data (latest-everything, test_krakenuniq)
10m 57s
Run pipeline with test data (latest-everything, test_malt)
6m 53s
Run pipeline with test data (latest-everything, test_malt)
6m 53s
Run pipeline with test data (latest-everything, test_malt)
6m 53s
Run pipeline with test data (latest-everything, test_motus)
20m 58s
Run pipeline with test data (latest-everything, test_motus)
20m 58s
Run pipeline with test data (latest-everything, test_motus)
20m 58s
Run pipeline with test data (latest-everything, test_falco)
6m 24s
Run pipeline with test data (latest-everything, test_falco)
6m 24s
Run pipeline with test data (latest-everything, test_falco)
6m 24s
Run pipeline with test data (latest-everything, test_fastp)
9m 47s
Run pipeline with test data (latest-everything, test_fastp)
9m 47s
Run pipeline with test data (latest-everything, test_fastp)
9m 47s
Run pipeline with test data (latest-everything, test_adapterremoval)
12m 59s
Run pipeline with test data (latest-everything, test_adapterremoval)
12m 59s
Run pipeline with test data (latest-everything, test_adapterremoval)
12m 59s
Run pipeline with test data (latest-everything, test_bbduk)
12m 7s
Run pipeline with test data (latest-everything, test_bbduk)
12m 7s
Run pipeline with test data (latest-everything, test_bbduk)
12m 7s
Run pipeline with test data (latest-everything, test_prinseqplusplus)
9m 27s
Run pipeline with test data (latest-everything, test_prinseqplusplus)
9m 27s
Run pipeline with test data (latest-everything, test_prinseqplusplus)
9m 27s
12h 32m 43s