Remove parameters

nf-core · Aug 1, 2023 · e5d09fa · e5d09fa
1 parent ea9019a
commit e5d09fa
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diff --git a/nextflow.config b/nextflow.config
@@ -156,8 +156,6 @@ params {
 
     // kmcp
     run_kmcp     = false
-    kmcp_taxdump = null
-    kmcp_taxid   = null
     kmcp_mode    = 3      // default  kmcp profiling value
 
     // ganon

diff --git a/nextflow_schema.json b/nextflow_schema.json
@@ -507,19 +507,6 @@
                     "description": "Turn on classification with kmcp.",
                     "fa_icon": "fas fa-toggle-on"
                 },
-                "kmcp_taxdump": {
-                    "type": "string",
-                    "default": "None",
-                    "description": "Directory of NCBI taxonomy dump files, names.dmp and nodes.dmp",
-                    "help_text": "The files merged.dmp and delnodes.dmp are optional.",
-                    "fa_icon": "fas fa-folder-open"
-                },
-                "kmcp_taxid": {
-                    "type": "string",
-                    "default": "None",
-                    "description": "Tabular two-column file(s) mapping reference IDs to TaxIds.",
-                    "fa_icon": "fas fa-sort-amount-down-alt"
-                },
                 "kmcp_mode": {
                     "type": "integer",
                     "default": 3,