Open PR with tools API docs based on webhook call #96
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Open PR with tools API docs based on webhook call | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| ref_name: | |
| description: 'The name of the release branch' | |
| required: true | |
| default: 'dev' | |
| jobs: | |
| api-docs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Checkout tools code | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: 'nf-core/tools' | |
| ref: ${{ inputs.ref_name }} | |
| path: 'tools' | |
| - name: setup node | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: '20' | |
| - name: Install dependencies | |
| run: | | |
| npm install remark unist-util-visit | |
| # Install pre-commit | |
| - uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5 | |
| with: | |
| python-version: 3.11 | |
| # install prettier plugins | |
| - run: npm install --only=dev | |
| - name: Install pre-commit | |
| run: pip install pre-commit | |
| - name: install nf-core | |
| run: | | |
| cd tools | |
| pip install --upgrade -r requirements-dev.txt -e . | |
| - name: run API generation script | |
| run: | | |
| cd tools | |
| pip install sphinx-markdown-builder | |
| bash docs/api/generate-api-docs.sh --release ${{ inputs.ref_name }} | |
| - name: remove tools code | |
| run: rm -rf tools | |
| - name: Run pre-commit | |
| id: pre-commit | |
| run: git add . && pre-commit run --all-files | |
| continue-on-error: true | |
| - name: Commit & push changes | |
| id: commit-and-push | |
| run: | | |
| git config user.email "[email protected]" | |
| git config user.name "nf-core-bot" | |
| # restore package.json changes | |
| git restore package.json | |
| git restore package-lock.json | |
| git add . | |
| git status | |
| git commit -m "[automated] Update nf-core/tools API docs for ${{ inputs.ref_name }}" | |
| - name: Create PR | |
| uses: peter-evans/create-pull-request@c5a7806660adbe173f04e3e038b0ccdcd758773c # v6 | |
| with: | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| commit-message: Update nf-core/tools API docs for ${{inputs.ref_name}} | |
| title: Update nf-core/tools API docs for ${{inputs.ref_name}} | |
| body: | | |
| This PR updates the nf-core/tools API docs for ${{inputs.ref_name}}. | |
| Please review the changes and merge if they look good. | |
| branch: 'update-api-docs-${{inputs.ref_name}}' | |
| delete-branch: true | |
| base: 'main' | |
| draft: false |