fix missing samples bug

nvnieuwk · Jan 23, 2024 · 1efb192 · 1efb192
1 parent b6376dc
commit 1efb192
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Showing 2 changed files with 11 additions and 5 deletions.
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -0,0 +1,7 @@
+# 0.1.1 - Transform
+## Fixes
+- Fixed a bug where the samples were missing from the header
+
+# 0.1.0 - Change
+
+Initial release
diff --git a/svync_api/execute.go b/svync_api/execute.go
@@ -127,14 +127,13 @@ func parseLine(
 	stdout bool,
 	variantCount *int,
 ) {
-	if !strings.HasSuffix(line, "#") && !*headerIsMade {
-		writeHeader(config, Cctx, header, outputFile, stdout)
-		*headerIsMade = true
-	}
-
 	if strings.HasPrefix(line, "#") {
 		header.parse(line)
 	} else {
+		if !*headerIsMade {
+			writeHeader(config, Cctx, header, outputFile, stdout)
+			*headerIsMade = true
+		}
 		// id := strings.Split(line, "\t")[2]
 		variant := createVariant(line, header, Cctx)