TASK-6515 - Port Patch 1.10.6(.1) -> 2.2.1 #702
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…elease process #TASK-6264
… clinical variants, #TASK-6347 On branch TASK-6347 Changes to be committed: modified: cellbase-lib/src/main/java/org/opencb/cellbase/lib/builders/clinical/variant/ClinicalIndexer.java
…nd Gwas, files to download; and update Cosmic version, #TASK-6347 On branch TASK-6347 Changes to be committed: modified: cellbase-core/src/main/resources/configuration.yml modified: cellbase-lib/src/main/java/org/opencb/cellbase/lib/builders/clinical/variant/CosmicIndexer.java modified: cellbase-lib/src/main/java/org/opencb/cellbase/lib/download/ClinicalDownloadManager.java
…on of the GWAS Catalog, #TASK-6347 On branch TASK-6347 Changes to be committed: modified: cellbase-core/src/main/resources/configuration.yml
…sion, #TASK-6347 On branch TASK-6347 Changes to be committed: modified: cellbase-lib/src/main/java/org/opencb/cellbase/lib/EtlCommons.java
On branch TASK-6347 Changes to be committed: modified: cellbase-lib/src/main/java/org/opencb/cellbase/lib/builders/clinical/variant/ClinVarIndexer.java
…file; and fix some sonnar issues, #TASK-6347 On branch TASK-6347 Changes to be committed: modified: cellbase-lib/src/main/java/org/opencb/cellbase/lib/builders/clinical/variant/GwasIndexer.java
On branch TASK-6347 Changes to be committed: modified: cellbase-lib/src/main/java/org/opencb/cellbase/lib/builders/clinical/variant/ClinVarIndexer.java
TASK-6347 Fix normalization issue in ClinVar
jtarraga
approved these changes
Aug 8, 2024
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TASK-6515 - Port Patch 1.10.6(.1) -> 2.2.1