Merge pull request #2320 from opencb/TASK-4810 #755
j-colldevelop.yml
on: push
build
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Build Java app
10m 33s
test
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Execute Sonar Analysis
13m 34s
test
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Execute JUnit and Jacoco tests
2h 36m
deploy-docker
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Push Docker image
deploy-maven
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Deploy to Maven and GitHub Packages
Annotations
3 errors
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VariantFieldTest.checkAnnotationSubFields:
opencga-storage/opencga-storage-core/src/test/java/org/opencb/opencga/storage/core/variant/adaptors/VariantFieldTest.java#L43
expected:<[additionalAttributes, alternate, ancestralAllele, cancerHotspots, chromosome, consequenceTypes, conservation, cytoband, displayConsequenceType, drugs, end, functionalScore, geneCancerAssociations, geneConstraints, geneDrugInteraction, geneExpression, geneMirnaTargets, geneTraitAssociation, gwas, hgvs, id, minorAllele, minorAlleleFreq, pharmacogenomics, populationFrequencies, reference, repeat, start, traitAssociation, xrefs]> but was:<[additionalAttributes, alternate, ancestralAllele, cancerHotspots, chromosome, consequenceTypes, conservation, cytoband, displayConsequenceType, drugs, end, functionalScore, geneCancerAssociations, geneConstraints, geneDrugInteraction, geneExpression, geneMirnaTargets, geneTraitAssociation, gwas, hgvs, id, minorAllele, minorAlleleFreq, populationFrequencies, reference, repeat, start, traitAssociation, xrefs]>
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test / Execute JUnit and Jacoco tests
There were 1 failed tests
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VariantFieldTest.checkAnnotationSubFields:
opencga-storage/opencga-storage-core/src/test/java/org/opencb/opencga/storage/core/variant/adaptors/VariantFieldTest.java#L43
expected:<[additionalAttributes, alternate, ancestralAllele, cancerHotspots, chromosome, consequenceTypes, conservation, cytoband, displayConsequenceType, drugs, end, functionalScore, geneCancerAssociations, geneConstraints, geneDrugInteraction, geneExpression, geneMirnaTargets, geneTraitAssociation, gwas, hgvs, id, minorAllele, minorAlleleFreq, pharmacogenomics, populationFrequencies, reference, repeat, start, traitAssociation, xrefs]> but was:<[additionalAttributes, alternate, ancestralAllele, cancerHotspots, chromosome, consequenceTypes, conservation, cytoband, displayConsequenceType, drugs, end, functionalScore, geneCancerAssociations, geneConstraints, geneDrugInteraction, geneExpression, geneMirnaTargets, geneTraitAssociation, gwas, hgvs, id, minorAllele, minorAlleleFreq, populationFrequencies, reference, repeat, start, traitAssociation, xrefs]>
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Artifacts
Produced during runtime
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build-folder
Expired
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801 MB |
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