Prepare release 3.0.2

opencb · Oct 30, 2024 · 20423c3 · 20423c3
1 parent 40484f0
commit 20423c3
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Showing 28 changed files with 43 additions and 44 deletions.
diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml
@@ -12,19 +12,19 @@ jobs:
     with:
       maven_opts: -P hdp3.1,RClient -Dopencga.war.name=opencga -Dcheckstyle.skip
 
-#  deploy-maven:
-#    uses: opencb/java-common-libs/.github/workflows/deploy-maven-repository-workflow.yml@develop
-#    needs: build
-#    with:
-#      maven_opts: -P hdp3.1 -Dopencga.war.name=opencga
-#    secrets: inherit
-#
-#  deploy-docker:
-#    uses: opencb/java-common-libs/.github/workflows/deploy-docker-hub-workflow.yml@develop
-#    needs: build
-#    with:
-#      cli: python3 ./build/cloud/docker/docker-build.py push --images base,init --tag ${{ needs.build.outputs.version }}
-#    secrets: inherit
+  deploy-maven:
+    uses: opencb/java-common-libs/.github/workflows/deploy-maven-repository-workflow.yml@develop
+    needs: build
+    with:
+      maven_opts: -P hdp3.1 -Dopencga.war.name=opencga
+    secrets: inherit
+
+  deploy-docker:
+    uses: opencb/java-common-libs/.github/workflows/deploy-docker-hub-workflow.yml@develop
+    needs: build
+    with:
+      cli: python3 ./build/cloud/docker/docker-build.py push --images base,init --tag ${{ needs.build.outputs.version }}
+    secrets: inherit
 
   deploy-python:
     uses: opencb/java-common-libs/.github/workflows/deploy-python-workflow.yml@develop
@@ -36,8 +36,7 @@ jobs:
 
   release:
     uses: opencb/java-common-libs/.github/workflows/release-github-workflow.yml@develop
-   # needs: [ build, deploy-maven, deploy-docker, deploy-python ]
-    needs: deploy-python
+    needs: [ build, deploy-maven, deploy-docker, deploy-python ]
     with:
       artifact: build-folder
       file: |

diff --git a/opencga-analysis/pom.xml b/opencga-analysis/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-app/pom.xml b/opencga-app/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-catalog/pom.xml b/opencga-catalog/pom.xml
@@ -23,7 +23,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-client/pom.xml b/opencga-client/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-clinical/pom.xml b/opencga-clinical/pom.xml
@@ -5,7 +5,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
     <modelVersion>4.0.0</modelVersion>

diff --git a/opencga-core/pom.xml b/opencga-core/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-master/pom.xml b/opencga-master/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <artifactId>opencga</artifactId>
         <groupId>org.opencb.opencga</groupId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-server/pom.xml b/opencga-server/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-storage/opencga-storage-app/pom.xml b/opencga-storage/opencga-storage-app/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-storage/opencga-storage-benchmark/pom.xml b/opencga-storage/opencga-storage-benchmark/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <artifactId>opencga-storage</artifactId>
         <groupId>org.opencb.opencga</groupId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-storage/opencga-storage-core/pom.xml b/opencga-storage/opencga-storage-core/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/...ga-storage-hadoop/opencga-storage-hadoop-compat/opencga-storage-hadoop-compat-api/pom.xml b/...ga-storage-hadoop/opencga-storage-hadoop-compat/opencga-storage-hadoop-compat-api/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage-hadoop-compat</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/...orage-hadoop/opencga-storage-hadoop-compat/opencga-storage-hadoop-compat-hbase2.0/pom.xml b/...orage-hadoop/opencga-storage-hadoop-compat/opencga-storage-hadoop-compat-hbase2.0/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage-hadoop-compat</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/...orage-hadoop/opencga-storage-hadoop-compat/opencga-storage-hadoop-compat-hbase2.2/pom.xml b/...orage-hadoop/opencga-storage-hadoop-compat/opencga-storage-hadoop-compat-hbase2.2/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage-hadoop-compat</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/...orage-hadoop/opencga-storage-hadoop-compat/opencga-storage-hadoop-compat-hbase2.4/pom.xml b/...orage-hadoop/opencga-storage-hadoop-compat/opencga-storage-hadoop-compat-hbase2.4/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage-hadoop-compat</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-compat/pom.xml b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-compat/pom.xml
@@ -23,7 +23,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage-hadoop</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/pom.xml b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-core/pom.xml
@@ -23,7 +23,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage-hadoop</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/...encga-storage-hadoop/opencga-storage-hadoop-lib/opencga-storage-hadoop-lib-emr6.1/pom.xml b/...encga-storage-hadoop/opencga-storage-hadoop-lib/opencga-storage-hadoop-lib-emr6.1/pom.xml
@@ -7,7 +7,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage-hadoop-lib</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/...ncga-storage-hadoop/opencga-storage-hadoop-lib/opencga-storage-hadoop-lib-emr6.13/pom.xml b/...ncga-storage-hadoop/opencga-storage-hadoop-lib/opencga-storage-hadoop-lib-emr6.13/pom.xml
@@ -7,7 +7,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage-hadoop-lib</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/...encga-storage-hadoop/opencga-storage-hadoop-lib/opencga-storage-hadoop-lib-hdi5.1/pom.xml b/...encga-storage-hadoop/opencga-storage-hadoop-lib/opencga-storage-hadoop-lib-hdi5.1/pom.xml
@@ -7,7 +7,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage-hadoop-lib</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/...encga-storage-hadoop/opencga-storage-hadoop-lib/opencga-storage-hadoop-lib-hdp3.1/pom.xml b/...encga-storage-hadoop/opencga-storage-hadoop-lib/opencga-storage-hadoop-lib-hdp3.1/pom.xml
@@ -7,7 +7,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage-hadoop-lib</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-lib/pom.xml b/opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-lib/pom.xml
@@ -23,7 +23,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage-hadoop</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-storage/opencga-storage-hadoop/pom.xml b/opencga-storage/opencga-storage-hadoop/pom.xml
@@ -23,7 +23,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-storage/opencga-storage-server/pom.xml b/opencga-storage/opencga-storage-server/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga-storage</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-storage/pom.xml b/opencga-storage/pom.xml
@@ -22,7 +22,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/opencga-test/pom.xml b/opencga-test/pom.xml
@@ -24,7 +24,7 @@
     <parent>
         <groupId>org.opencb.opencga</groupId>
         <artifactId>opencga</artifactId>
-        <version>3.0.1</version>
+        <version>3.0.2-SNAPSHOT</version>
         <relativePath>../pom.xml</relativePath>
     </parent>
 

diff --git a/pom.xml b/pom.xml
@@ -22,7 +22,7 @@
 
     <groupId>org.opencb.opencga</groupId>
     <artifactId>opencga</artifactId>
-    <version>3.0.1</version>
+    <version>3.0.2-SNAPSHOT</version>
     <packaging>pom</packaging>
 
     <name>OpenCGA</name>
@@ -43,8 +43,8 @@
     </modules>
 
     <properties>
-        <pyopencga.version>3.0.1</pyopencga.version>
-        <opencgar.version>3.0.1</opencgar.version>
+        <pyopencga.version>3.0.2</pyopencga.version>
+        <opencgar.version>3.0.2</opencgar.version>
         <cellbase.version>6.0.0</cellbase.version>
         <biodata.version>3.0.0</biodata.version>
         <java-common-libs.version>5.0.0</java-common-libs.version>