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fun numbers
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ekg committed Oct 15, 2021
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Expand Up @@ -25,7 +25,7 @@ haplotype_id := number
contig_or_scaffold_name := string
```

For instance, `HG002#1#ctg3320` names `ctg3320` on the first haplotype (or phase group) of `HG002`, while `HG002#2#ctg9876` is contig `ctg9876` on the other.
For instance, `HG002#1#ctg1234` names `ctg1234` on the first haplotype (or phase group) of `HG002`, while `HG002#2#ctg9876` is contig `ctg9876` on the other.

We suggest using `#` as a delimiter, but any character not used in your contig or sample identifiers will work.
Tools supporting PanSN should allow the user to change the delimiter.
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