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check installed tools and report issues #389

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AndreaGuarracino merged 1 commit into master from check_installed_tools

Apr 9, 2024

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AndreaGuarracino commented Apr 9, 2024

./pggb -i LPA.fa.gz -V 'chm13' -o out
[pggb] ERROR: the following tools are not installed or not in the PATH:
- wfmash
- seqwish
- smoothxg
- odgi
- gfaffix
- vcfbub
- vcfwave
- MultiQC

to avoid issues like in #388


          check installed tools and report issues

AndreaGuarracino merged commit 0dfa42b into master

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