Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update Galaxy instance for integration tests #1404

Open
apetkau opened this issue Nov 3, 2022 · 0 comments
Open

Update Galaxy instance for integration tests #1404

apetkau opened this issue Nov 3, 2022 · 0 comments
Labels
developer Issues effecting developers of IRIDA, but that aren't user facing enhancement galaxy Galaxy for workflows and IRIDA's communication with Galaxy test Issues relating to IRIDA's test suite

Comments

@apetkau
Copy link
Member

apetkau commented Nov 3, 2022

What needs changed?

The version and mechanism of launching Galaxy (using Docker) for integration tests.

How does it work now?

This uses a custom modified version of Galaxy within Docker built using code from https://github.com/phac-nml/irida/tree/development/docker/integration-testing. This ultimately is derived from https://github.com/bgruening/docker-galaxy-stable. The current version of Galaxy is 20.09.

How should it work?

I would like to be able to update to a more recent version of Galaxy for integration tests (e.g., 22.05).

Additional information

None.

@apetkau apetkau added enhancement test Issues relating to IRIDA's test suite galaxy Galaxy for workflows and IRIDA's communication with Galaxy developer Issues effecting developers of IRIDA, but that aren't user facing labels Nov 3, 2022
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
developer Issues effecting developers of IRIDA, but that aren't user facing enhancement galaxy Galaxy for workflows and IRIDA's communication with Galaxy test Issues relating to IRIDA's test suite
Projects
None yet
Development

No branches or pull requests

1 participant