docs: changing title, ignoring csv, xpt and rds files

.gitignore

@@ -6,4 +6,13 @@ cache
 _freeze
 _site
 site_libs
-.DS_Store
+.DS_Store
+.Rproj.user
+*.csv
+*.xpt
+*.rds
+project.Rproj
+.Rhistory
+pharmaverse.examples.Rcheck/
+pharmaverse.examples*.tar.gz
+pharmaverse.examples*.tgz

adam/adpc.qmd

@@ -1,5 +1,5 @@
 ---
-title: "ADPC Template Walkthrough"
+title: "ADPC"
 ---
 
 The Non-compartmental analysis (NCA) ADaM uses the CDISC Implementation Guide (<https://www.cdisc.org/standards/foundational/adam/adamig-non-compartmental-analysis-input-data-v1-0>). This example presented uses underlying `EX` and `PC` domains where the `EX` and `PC` domains represent data as collected and the `ADPC` ADaM is output. However, the example can be applied to situations where an `EC` domain is used as input instead of `EX` and/or `ADNCA` or another ADaM is created.

adam/adppk.qmd

@@ -1,5 +1,5 @@
 ---
-title: "ADPPK Template Walkthrough"
+title: "ADPPK"
 ---
 
 The Population PK Analysis Data (ADPPK) follows the CDISC Implementation Guide (<https://www.cdisc.org/standards/foundational/adam/basic-data-structure-adam-poppk-implementation-guide-v1-0>). Population PK models generally make use of nonlinear mixed effects models that require numeric variables. The data used in the models will include both dosing and concentration records, relative time variables, and numeric covariate variables. A `DV` or dependent variable is often expected. This is equivalent to the ADaM `AVAL` variable and will be included in addition to `AVAL` for ADPPK.

index.qmd

@@ -4,11 +4,11 @@ title: "`pharmaverse` examples"
 
 This book contains end-to-end examples of using pharmaverse packages together to
 achieve common clinical reporting analyses.
-The examples use consistent source SDTMs to create ADaMs (such as `ADSL` and `ADAE`)
+The examples use consistent source SDTMs to create ADaMs (such as `ADSL`, `ADPC`, `ADPPK`)
 and using these as input to produce some familiar Tables/Listings/Graphs and
 associated interactive displays (via Shiny).
 
-Other examples may be included here, e.g. for PK/PD or Therapeutic Area
+Other examples may be included here, e.g. Therapeutic Area
 specifics (such as Oncology or Vaccines).
 
 Note that this examples book should only be used to show how collections of