pkp/pkp-lib#10292 Controlled Vocab DAO to Eloquent Model

dbscripts/xml/upgrade.xml

@@ -138,6 +138,7 @@
 		<migration class="PKP\migration\upgrade\v3_5_0\I10041_UserGroupsAndUserUserGroupsMastheadValues"/>
         <migration class="PKP\migration\upgrade\v3_5_0\I9771_OrcidMigration"/>
 		<migration class="APP\migration\upgrade\v3_5_0\I5885_RenameReviewReminderSettingsName"/>
+		<migration class="PKP\migration\upgrade\v3_5_0\I10292_RemoveControlledVocabEntrySettingType"/>
 	</upgrade>
 
 	<!-- Update plugin configuration - should be done as the final upgrade task -->

plugins/metadata/dc11/filter/Dc11SchemaPublicationFormatAdapter.php

@@ -28,15 +28,14 @@
 use APP\publicationFormat\PublicationFormat;
 use APP\section\Section;
 use APP\submission\Submission;
+use PKP\controlledVocab\ControlledVocab;
 use PKP\db\DAORegistry;
 use PKP\facades\Locale;
 use PKP\i18n\LocaleConversion;
 use PKP\metadata\MetadataDataObjectAdapter;
 use PKP\metadata\MetadataDescription;
 use PKP\plugins\Hook;
 use PKP\plugins\PluginRegistry;
-use PKP\submission\SubmissionKeywordDAO;
-use PKP\submission\SubmissionSubjectDAO;
 
 class Dc11SchemaPublicationFormatAdapter extends MetadataDataObjectAdapter
 {
@@ -99,12 +98,20 @@ public function extractMetadataFromDataObject(&$publicationFormat)
         }
 
         // Subject
-        $submissionKeywordDao = DAORegistry::getDAO('SubmissionKeywordDAO'); /** @var SubmissionKeywordDAO $submissionKeywordDao */
-        $submissionSubjectDao = DAORegistry::getDAO('SubmissionSubjectDAO'); /** @var SubmissionSubjectDAO $submissionSubjectDao */
         $supportedLocales = array_keys(Locale::getSupportedFormLocales());
         $subjects = array_merge_recursive(
-            (array) $submissionKeywordDao->getKeywords($publication->getId(), $supportedLocales),
-            (array) $submissionSubjectDao->getSubjects($publication->getId(), $supportedLocales)
+            Repo::controlledVocab()->getBySymbolic(
+                ControlledVocab::CONTROLLED_VOCAB_SUBMISSION_KEYWORD,
+                Application::ASSOC_TYPE_PUBLICATION,
+                $publication->getId(),
+                $supportedLocales
+            ),
+            Repo::controlledVocab()->getBySymbolic(
+                ControlledVocab::CONTROLLED_VOCAB_SUBMISSION_SUBJECT,
+                Application::ASSOC_TYPE_PUBLICATION,
+                $publication->getId(),
+                $supportedLocales
+            )
         );
         $this->_addLocalizedElements($dc11Description, 'dc:subject', $subjects);
 

plugins/reports/monographReport/Report.php

@@ -32,14 +32,10 @@
 use Illuminate\Support\LazyCollection;
 use IteratorAggregate;
 use PKP\category\Category;
-use PKP\db\DAORegistry;
+use PKP\controlledVocab\ControlledVocab;
 use PKP\facades\Locale;
 use PKP\security\Role;
 use PKP\stageAssignment\StageAssignment;
-use PKP\submission\SubmissionAgencyDAO;
-use PKP\submission\SubmissionDisciplineDAO;
-use PKP\submission\SubmissionKeywordDAO;
-use PKP\submission\SubmissionSubjectDAO;
 use PKP\user\User;
 use PKP\userGroup\UserGroup;
 use Traversable;
@@ -366,39 +362,55 @@ private function getStatus(): string
      */
     private function getKeywords(): string
     {
-        /** @var SubmissionKeywordDAO */
-        $submissionKeywordDao = DAORegistry::getDAO('SubmissionKeywordDAO');
-        return $this->flattenKeywords($submissionKeywordDao->getKeywords($this->publication->getId()));
+        return $this->flattenKeywords(
+            Repo::controlledVocab()->getBySymbolic(
+                ControlledVocab::CONTROLLED_VOCAB_SUBMISSION_KEYWORD,
+                Application::ASSOC_TYPE_PUBLICATION,
+                $this->publication->getId()
+            )
+        );
     }
 
     /**
      * Retrieves the subjects separated by commas
      */
     private function getSubjects(): string
     {
-        /** @var SubmissionSubjectDAO */
-        $submissionSubjectDao = DAORegistry::getDAO('SubmissionSubjectDAO');
-        return $this->flattenKeywords($submissionSubjectDao->getSubjects($this->publication->getId()));
+        return $this->flattenKeywords(
+            Repo::controlledVocab()->getBySymbolic(
+                ControlledVocab::CONTROLLED_VOCAB_SUBMISSION_SUBJECT,
+                Application::ASSOC_TYPE_PUBLICATION,
+                $this->publication->getId()
+            )
+        );
     }
 
     /**
      * Retrieves the disciplines separated by commas
      */
     private function getDisciplines(): string
     {
-        /** @var SubmissionDisciplineDAO */
-        $submissionDisciplineDao = DAORegistry::getDAO('SubmissionDisciplineDAO');
-        return $this->flattenKeywords($submissionDisciplineDao->getDisciplines($this->publication->getId()));
+        return $this->flattenKeywords(
+            Repo::controlledVocab()->getBySymbolic(
+                ControlledVocab::CONTROLLED_VOCAB_SUBMISSION_DISCIPLINE,
+                Application::ASSOC_TYPE_PUBLICATION,
+                $this->publication->getId()
+            )
+        );
     }
 
     /**
      * Retrieves the agencies separated by commas
      */
     private function getAgencies(): string
     {
-        /** @var SubmissionAgencyDAO */
-        $submissionAgencyDao = DAORegistry::getDAO('SubmissionAgencyDAO');
-        return $this->flattenKeywords($submissionAgencyDao->getAgencies($this->publication->getId()));
+        return $this->flattenKeywords(
+            Repo::controlledVocab()->getBySymbolic(
+                ControlledVocab::CONTROLLED_VOCAB_SUBMISSION_AGENCY,
+                Application::ASSOC_TYPE_PUBLICATION,
+                $this->publication->getId()
+            )
+        );
     }
 
     /**

tools/cleanReviewerInterests.php

@@ -14,11 +14,11 @@
  * @brief CLI tool to remove user interests that are not referenced by any user accounts.
  */
 
+use APP\facades\Repo;
+use Illuminate\Support\Collection;
 use PKP\cliTool\CommandLineTool;
-use PKP\controlledVocab\ControlledVocabDAO;
-use PKP\controlledVocab\ControlledVocabEntryDAO;
-use PKP\db\DAORegistry;
-use PKP\user\InterestDAO;
+use PKP\controlledVocab\ControlledVocabEntry;
+use PKP\user\interest\UserInterest;
 
 require(dirname(__FILE__) . '/bootstrap.php');
 
@@ -60,28 +60,21 @@ public function usage()
     public function execute()
     {
         $orphans = $this->_getOrphanVocabInterests();
-        if (!count($orphans)) {
+        if ($orphans->count() === 0) {
             echo "No user interests to remove.\n";
             exit(0);
         }
 
         $command = $this->parameters[0];
         switch ($command) {
             case '--show':
-                $interests = array_map(function ($entry) {
-                    return $entry->getData(InterestDAO::CONTROLLED_VOCAB_INTEREST);
-                }, $orphans);
+                $interests = $orphans->pluck(UserInterest::CONTROLLED_VOCAB_INTEREST)->toArray();
                 echo "Below are the user interests that are not referenced by any user account.\n";
                 echo "\t" . join("\n\t", $interests) . "\n";
                 break;
 
             case '--remove':
-                /** @var ControlledVocabEntryDAO */
-                $vocabEntryDao = DAORegistry::getDAO('ControlledVocabEntryDAO');
-                foreach ($orphans as $orphanVocab) {
-                    $vocabEntryDao->deleteObject($orphanVocab);
-                }
-                echo count($orphans) . " entries deleted\n";
+                echo $orphans->toQuery()->delete() . " entries deleted\n";
                 break;
 
             default:
@@ -93,50 +86,17 @@ public function execute()
 
     /**
      * Returns user interests that are not referenced
-     *
-     * @return array array of ControlledVocabEntry object
      */
-    protected function _getOrphanVocabInterests()
+    protected function _getOrphanVocabInterests(): Collection
     {
-        /** @var InterestDAO */
-        $interestDao = DAORegistry::getDAO('InterestDAO');
-        /** @var ControlledVocabDAO */
-        $vocabDao = DAORegistry::getDAO('ControlledVocabDAO');
-        /** @var ControlledVocabEntryDAO */
-        $vocabEntryDao = DAORegistry::getDAO('ControlledVocabEntryDAO');
-
-        $interestVocab = $vocabDao->getBySymbolic(InterestDAO::CONTROLLED_VOCAB_INTEREST);
-        $vocabEntryIterator = $vocabEntryDao->getByControlledVocabId($interestVocab->getId());
-        $vocabEntryList = $vocabEntryIterator->toArray();
-
-        // list of vocab interests in db
-        $allInterestVocabIds = array_map(
-            function ($entry) {
-                return $entry->getId();
-            },
-            $vocabEntryList
-        );
-
-        // list of vocabs associated to users
-        $interests = $interestDao->getAllInterests();
-        $userInterestVocabIds = array_map(
-            function ($interest) {
-                return $interest->getId();
-            },
-            $interests->toArray()
-        );
-
-        // get the difference
-        $diff = array_diff($allInterestVocabIds, $userInterestVocabIds);
-
-        $orphans = array_filter(
-            $vocabEntryList,
-            function ($entry) use ($diff) {
-                return in_array($entry->getId(), $diff);
-            }
+        $controlledVocab = Repo::controlledVocab()->build(
+            UserInterest::CONTROLLED_VOCAB_INTEREST
         );
 
-        return $orphans;
+        return ControlledVocabEntry::query()
+            ->withControlledVocabId($controlledVocab->id)
+            ->whereDoesntHave('userInterest')
+            ->get();
     }
 }