Fix wrong aggregation of shap values #105
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Unit tests | |
| on: | |
| push: | |
| branches: [ main ] | |
| paths: | |
| - "powershap/**" | |
| - "tests/**" | |
| - "poetry.lock" | |
| - ".github/workflows/test.yml" | |
| pull_request: | |
| branches: [ main ] | |
| paths: | |
| - "powershap/**" | |
| - "tests/**" | |
| - "poetry.lock" | |
| - ".github/workflows/test.yml" | |
| jobs: | |
| test: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ['ubuntu-latest'] # TODO - do we add other OSes? | |
| python-version: ["3.9", "3.10", "3.11", "3.12"] | |
| defaults: | |
| run: | |
| shell: bash | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Poetry | |
| uses: snok/install-poetry@v1 | |
| with: | |
| version: 1.5.1 | |
| - name: Cache poetry | |
| id: cached-poetry-dependencies | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/.cache/pypoetry/virtualenvs | |
| key: ${{ runner.os }}-poetry-${{ hashFiles('poetry.lock') }}-python-${{ matrix.python-version }} | |
| - run: poetry --version | |
| - run: sudo apt-get install llvm # Because https://github.com/slundberg/shap/issues/1854 | |
| - name: Install dependencies | |
| run: poetry install --all-extras | |
| # Do not use caching (anymore) | |
| # if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true' | |
| # - name: Lint with flake8 | |
| # run: | | |
| # # stop the build if there are Python syntax errors or undefined names | |
| # flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| # flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Test with pytest | |
| run: | | |
| poetry run pytest --cov=powershap --junitxml=junit/test-results-${{ matrix.python-version }}.xml --cov-report=xml tests | |
| - name: Upload pytest test results | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: pytest-results-${{ matrix.python-version }} | |
| path: junit/test-results-${{ matrix.python-version }}.xml | |
| # Use always() to always run this step to publish test results when there are test failures | |
| if: ${{ always() }} | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v3 |