install additional deps of deps #104
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| name: Deploy lambdas to S3 and ECR | |
| on: | |
| push: | |
| branches: | |
| - master | |
| - genbank-preview | |
| paths: | |
| - '.github/workflows/deploy-lambdas.yaml' | |
| - 'lambdas/**' | |
| jobs: | |
| deploy-lambda-s3: | |
| strategy: | |
| matrix: | |
| path: | |
| - access_counts | |
| - indexer | |
| - pkgevents | |
| - pkgpush | |
| - pkgselect | |
| - preview | |
| - s3hash | |
| - s3select | |
| - status_reports | |
| - tabular_preview | |
| - transcode | |
| runs-on: ubuntu-latest | |
| # These permissions are needed to interact with GitHub's OIDC Token endpoint. | |
| permissions: | |
| id-token: write | |
| contents: read | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build zip | |
| run: | | |
| BUILDER_IMAGE=quiltdata/lambda:build-$(cat lambdas/${{ matrix.path }}/.python-version) | |
| touch ./out.zip | |
| docker run --rm \ | |
| --entrypoint /build_zip.sh \ | |
| -v "$PWD/lambdas/${{ matrix.path }}":/lambda/function:z \ | |
| -v "$PWD/lambdas/shared":/lambda/shared:z \ | |
| -v "$PWD/out.zip":/out.zip:z \ | |
| -v "$PWD/lambdas/scripts/build_zip.sh":/build_zip.sh:z \ | |
| "$BUILDER_IMAGE" | |
| - name: Configure AWS credentials from Prod account | |
| uses: aws-actions/configure-aws-credentials@v4 | |
| with: | |
| role-to-assume: arn:aws:iam::730278974607:role/github/GitHub-Quilt | |
| aws-region: us-east-1 | |
| - name: Upload zips to Prod S3 | |
| run: | | |
| s3_key="${{ matrix.path }}/${{ github.sha }}.zip" | |
| ./lambdas/scripts/upload_zip.sh ./out.zip "$AWS_REGION" "$s3_key" | |
| - name: Configure AWS credentials from GovCloud account | |
| uses: aws-actions/configure-aws-credentials@v4 | |
| with: | |
| role-to-assume: arn:aws-us-gov:iam::313325871032:role/github/GitHub-Quilt | |
| aws-region: us-gov-east-1 | |
| - name: Upload zips to GovCloud S3 | |
| run: | | |
| s3_key="${{ matrix.path }}/${{ github.sha }}.zip" | |
| ./lambdas/scripts/upload_zip.sh ./out.zip "$AWS_REGION" "$s3_key" | |
| deploy-lambda-ecr: | |
| strategy: | |
| matrix: | |
| path: | |
| - molecule | |
| - thumbnail | |
| runs-on: ubuntu-latest | |
| # These permissions are needed to interact with GitHub's OIDC Token endpoint. | |
| permissions: | |
| id-token: write | |
| contents: read | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build Docker image | |
| working-directory: ./lambdas/${{ matrix.path }} | |
| run: docker buildx build -t "quiltdata/lambdas/${{ matrix.path }}:${{ github.sha }}" -f Dockerfile .. | |
| - name: Configure AWS credentials from Prod account | |
| uses: aws-actions/configure-aws-credentials@v4 | |
| with: | |
| role-to-assume: arn:aws:iam::730278974607:role/github/GitHub-Quilt | |
| aws-region: us-east-1 | |
| - name: Push Docker image to Prod ECR | |
| run: ./lambdas/scripts/upload_ecr.sh 730278974607 "quiltdata/lambdas/${{ matrix.path }}:${{ github.sha }}" | |
| - name: Configure AWS credentials from GovCloud account | |
| uses: aws-actions/configure-aws-credentials@v4 | |
| with: | |
| role-to-assume: arn:aws-us-gov:iam::313325871032:role/github/GitHub-Quilt | |
| aws-region: us-gov-east-1 | |
| - name: Push Docker image to GovCloud ECR | |
| run: ./lambdas/scripts/upload_ecr.sh 313325871032 "quiltdata/lambdas/${{ matrix.path }}:${{ github.sha }}" |