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New data source added: Open Tree of Life. New functions for the data source
added: get_tolid(), get_tolid_(), and as.tolid() (#517)
related to above classification() gains new method for TOL data
related to above lowest_common() gains new method for TOL data
Now using ritis package, an external dependency for ITIS taxonomy
data. Note that a large number of ITIS functions were removed, and are
now available via the package ritis. However, there are still many
high level functions for working with ITIS data (see functions prefixed
with itis_), and get_tsn(), classification.tsn(), and similar
high level functions remain unchanged. (#525)
EUBON has a new API (v1.2). We now interact with that new API version.
In addition, eubon() fxn is now eubon_search(), although either still
work - though eubon() will be made defunct in the next version of
this package. Additional new functions were added: eubon_capabilities(), eubon_children(), and eubon_hierarchy() (#567)
lowest_common() function gains two new data source options: COL (Catalogue
of Life) and TOL (Tree of Life) (#505)
Addded new function synonyms_df() as a slim wrapper around data.table::rbindlist() to make it easy to combine many outputs
from synonyms() for a single data source - there is a lot of heterogeneity
among data sources in how they report synonyms data, so we don't attempt
to combine data across sources (#533)
Fixed bug in tax_name() in which when an invalid taxon was searched
for then classification() returned no data and caused an error.
Fixed now. (#560) thanks @ljvillanueva for reporting it!
Fixed bug in gnr_resolve() in which order of input names to the function
was not retained. fixed now. (#561) thanks @bomeara for reporting it!
Fixed bug in gbif_parse() - data format changed coming back from
GBIF - needed to replace NULL with NA (#568) thanks @ChrKoenig for
reporting it!