v0.10.0

CHANGES.md

@@ -1,9 +1,7 @@
 - [SeqKit v0.10.0](https://github.com/shenwei356/seqkit/releases/tag/v0.10.0)
 [![Github Releases (by Release)](https://img.shields.io/github/downloads/shenwei356/seqkit/v0.10.0/total.svg)](https://github.com/shenwei356/seqkit/releases/tag/v0.10.0)
-    - new command `seqkit mutate`: edit sequence (point mutation, insertion, deletion)
-- [SeqKit v0.9.4](https://github.com/shenwei356/seqkit/releases/tag/v0.9.4)
-[![Github Releases (by Release)](https://img.shields.io/github/downloads/shenwei356/seqkit/v0.9.4/total.svg)](https://github.com/shenwei356/seqkit/releases/tag/v0.9.4)
-    - `seqkit`: report error when input is directory now.
+    - `seqkit`: report error when input is directory.
+    - new command `seqkit mutate`: edit sequence (point mutation, insertion, deletion).
 - [SeqKit v0.9.3](https://github.com/shenwei356/seqkit/releases/tag/v0.9.3)
 [![Github Releases (by Release)](https://img.shields.io/github/downloads/shenwei356/seqkit/v0.9.3/total.svg)](https://github.com/shenwei356/seqkit/releases/tag/v0.9.3)
     - `seqkit stats`: fix panic for empty file. [#57](https://github.com/shenwei356/seqkit/issues/57)

doc/docs/download.md

@@ -6,10 +6,10 @@ SeqKit is implemented in [Go](https://golang.org/) programming language,
 
 ## Latest Version
 
-- [SeqKit v0.9.3](https://github.com/shenwei356/seqkit/releases/tag/v0.9.3)
-[![Github Releases (by Release)](https://img.shields.io/github/downloads/shenwei356/seqkit/v0.9.3/total.svg)](https://github.com/shenwei356/seqkit/releases/tag/v0.9.3)
-    - `seqkit stats`: fix panic for empty file. [#57](https://github.com/shenwei356/seqkit/issues/57)
-    - `seqkit translate`: add flag `-x/--allow-unknown-codon` to translate unknown codon to `X`. [#56](https://github.com/shenwei356/seqkit/issues/56)
+- [SeqKit v0.10.0](https://github.com/shenwei356/seqkit/releases/tag/v0.10.0)
+[![Github Releases (by Release)](https://img.shields.io/github/downloads/shenwei356/seqkit/v0.10.0/total.svg)](https://github.com/shenwei356/seqkit/releases/tag/v0.10.0)
+    - `seqkit`: report error when input is directory.
+    - new command `seqkit mutate`: edit sequence (point mutation, insertion, deletion).
 
 ### Please cite
 
@@ -26,12 +26,12 @@ SeqKit is implemented in [Go](https://golang.org/) programming language,
 
 OS     |Arch      |File, 中国镜像                                                                                                                                                                                  |Download Count
 :------|:---------|:------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
-Linux  |32-bit    |[seqkit_linux_386.tar.gz](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_linux_386.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_linux_386.tar.gz)                            |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_linux_386.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_linux_386.tar.gz)
-Linux  |**64-bit**|[**seqkit_linux_amd64.tar.gz**](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_linux_amd64.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_linux_amd64.tar.gz)                  |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_linux_amd64.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_linux_amd64.tar.gz)
-OS X   |32-bit    |[seqkit_darwin_386.tar.gz](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_darwin_386.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_darwin_386.tar.gz)                         |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_darwin_386.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_darwin_386.tar.gz)
-OS X   |**64-bit**|[**seqkit_darwin_amd64.tar.gz**](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_darwin_amd64.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_darwin_amd64.tar.gz)               |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_darwin_amd64.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_darwin_amd64.tar.gz)
-Windows|32-bit    |[seqkit_windows_386.exe.tar.gz](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_windows_386.exe.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_windows_386.exe.tar.gz)          |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_windows_386.exe.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_windows_386.exe.tar.gz)
-Windows|**64-bit**|[**seqkit_windows_amd64.exe.tar.gz**](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_windows_amd64.exe.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_windows_amd64.exe.tar.gz)|[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_windows_amd64.exe.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.9.3/seqkit_windows_amd64.exe.tar.gz)
+Linux  |32-bit    |[seqkit_linux_386.tar.gz](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_linux_386.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_linux_386.tar.gz)                            |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_linux_386.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_linux_386.tar.gz)
+Linux  |**64-bit**|[**seqkit_linux_amd64.tar.gz**](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_linux_amd64.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_linux_amd64.tar.gz)                  |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_linux_amd64.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_linux_amd64.tar.gz)
+OS X   |32-bit    |[seqkit_darwin_386.tar.gz](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_darwin_386.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_darwin_386.tar.gz)                         |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_darwin_386.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_darwin_386.tar.gz)
+OS X   |**64-bit**|[**seqkit_darwin_amd64.tar.gz**](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_darwin_amd64.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_darwin_amd64.tar.gz)               |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_darwin_amd64.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_darwin_amd64.tar.gz)
+Windows|32-bit    |[seqkit_windows_386.exe.tar.gz](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_windows_386.exe.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_windows_386.exe.tar.gz)          |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_windows_386.exe.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_windows_386.exe.tar.gz)
+Windows|**64-bit**|[**seqkit_windows_amd64.exe.tar.gz**](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_windows_amd64.exe.tar.gz), <br/> [中国镜像](http://app.shenwei.me/data/seqkit/seqkit_windows_amd64.exe.tar.gz)|[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/seqkit/latest/seqkit_windows_amd64.exe.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/seqkit/releases/download/v0.10.0/seqkit_windows_amd64.exe.tar.gz)
 
 
 ## Installation
@@ -101,6 +101,10 @@ Howto:
 
 ## Release History
 
+- [SeqKit v0.9.3](https://github.com/shenwei356/seqkit/releases/tag/v0.9.3)
+[![Github Releases (by Release)](https://img.shields.io/github/downloads/shenwei356/seqkit/v0.9.3/total.svg)](https://github.com/shenwei356/seqkit/releases/tag/v0.9.3)
+    - `seqkit stats`: fix panic for empty file. [#57](https://github.com/shenwei356/seqkit/issues/57)
+    - `seqkit translate`: add flag `-x/--allow-unknown-codon` to translate unknown codon to `X`. [#56](https://github.com/shenwei356/seqkit/issues/56)
 - [SeqKit v0.9.2](https://github.com/shenwei356/seqkit/releases/tag/v0.9.2)
 [![Github Releases (by Release)](https://img.shields.io/github/downloads/shenwei356/seqkit/v0.9.2/total.svg)](https://github.com/shenwei356/seqkit/releases/tag/v0.9.2)
     - `seqkit`: stricter checking for value of global flag `-t/--seq-type`.

doc/docs/usage.md

@@ -164,7 +164,7 @@ reproduced in different environments with same random seed.
 ```
 SeqKit -- a cross-platform and ultrafast toolkit for FASTA/Q file manipulation
 
-Version: 0.10.0-dev
+Version: 0.10.0
 
 Author: Wei Shen <[email protected]>
 

seqkit/cmd/version.go

@@ -29,7 +29,7 @@ import (
 )
 
 // VERSION of seqkit
-const VERSION = "0.10.0-dev2"
+const VERSION = "0.10.0"
 
 // versionCmd represents the version command
 var versionCmd = &cobra.Command{