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SeqKit v0.4.1

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@shenwei356 shenwei356 released this 16 Dec 08:48
· 683 commits to master since this release

_64-bit versions are highly recommended._

Changelog

  • enchancement: remove redudant regions for seqkit locate. e.g.:

    previous version:

    $ echo -ne ">test\nAACGcgcA" | seqkit locate -i -P -p "(CG)+"
    seqID   patternName     pattern strand  start   end     matched
    test    (CG)+   (CG)+   +       3       6       CGcg
    test    (CG)+   (CG)+   +       5       6       cg
    

    current version:

    $ echo -ne ">test\nAACGcgcA" | ./seqkit locate -i -P -p "(CG)+"
    seqID   patternName     pattern strand  start   end     matched
    test    (CG)+   (CG)+   +       3       6       CGcg