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Updated embedded libraries: SZ3 #289

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Commits on Aug 27, 2024

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  2. Remove src/c-blosc

    t20100 committed Aug 27, 2024
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  3. Squashed 'src/c-blosc/' content from commit 43377c44

    git-subtree-dir: src/c-blosc
    git-subtree-split: 43377c44427868b1d2d9b11b43d6ade2ba75216c
    t20100 committed Aug 27, 2024
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  5. Squashed 'src/c-blosc2/' changes from 7424ecfb6..394c862c8

    841c6ae72 Getting ready for release 2.15.1
    843bb60d9 Undo the warning fix
    253c2cc03 Fix a warning on Linux
    bb66cce09 Internal LZ4 sources bumped to 1.10.0.
    7be3f6fbf load_lib: allow direct loading of library by name
    3669c5c4c Add b2nd_nans method #624
    0ec41df74 Add info about filename extensions
    f3aea9edc Add a check of architecture to select simd probing implementation
    5ff43ff87 Add stubs and runtime checks for ALTIVEC shuffle/bitshuffle implementation
    64e1ce8a4 Add stubs and runtime checks for NEON shuffle/bitshuffle implementation
    bf437c382 Add stubs and runtime checks for AVX512 bitshuffle implementation
    9f99b3af6 Add stubs and runtime checks for SSE2 shuffle/bitshuffle implementation
    a675b071f Add stubs and runtime checks for AVX2 shuffle/bitshuffle implementation
    2a07f3457 Do not pass `-m` flags when compiling `shuffle.c`
    dc5d651c3 Post 2.15.0 release actions done
    
    git-subtree-dir: src/c-blosc2
    git-subtree-split: 394c862c893354241c4e9b95a3142c5af7c90b9d
    t20100 committed Aug 27, 2024
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  7. remove src/fcidecomp

    t20100 committed Aug 27, 2024
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  10. update c-blosc2 macros

    t20100 committed Aug 27, 2024
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  11. Squashed 'src/SZ3/' changes from 4bbe9df7e..b3dab4018

    b3dab4018 Merge pull request silx-kit#60 from szcompressor/newapi
    d70c22264 update readme
    35115beeb update readme
    352c1a0f6 update compress api
    fe6eef7e3 update compress api
    75c906dda update compress api
    ad47f20d2 update compress api
    52b4f439c update compress api
    7a5447c79 update compress api
    cb87901dd Merge remote-tracking branch 'origin/newapi' into newapi
    c1d6504e1 update hdf5 filter
    533292f9f Merge branch 'refs/heads/master' into newapi
    b3dac0c65 update readme
    3f478178d Merge pull request silx-kit#56 from juntyr/32bit-hash
    f8fc2cb33 fix int overflow in quantization
    e52a2c30f Add support for 32bit systems by falling back to std::unordered_map
    f6cae37f5 add link to fortran api
    90c66bed1 modify MDZ CR calculation to include the first frame which is stored losslessly.
    09494b13c fix bug in MDZ for 1D inputs
    dde630245 add noprediction compressor
    47593621f bugfix
    fdd6dee6e API rewrite data version check
    a887550ed API rewrite data version check
    5bab19c5d API rewrite data version check
    1ea5d5b07 API rewrite data version check
    e78f4832f Add annotation
    be68d6cbe bug fix for openmp
    800c3248e bug fix for interp
    d06710a55 bug fix for interp
    7fc2cb519 bug fix for MDZ
    3568914cd Merge remote-tracking branch 'origin/master'
    5f835fb74 bug fix for MDZ
    be68d645b Merge pull request silx-kit#47 from robertu94/master
    e308ebf85 Merge branch 'master' of github.com:szcompressor/sz3
    6198db715 default initalize config
    162674f87 Merge pull request silx-kit#46 from mrmbernardi/patch-1
    f834756f9 Fix SZFastFrontend::size_est() returning undefined value
    13e79072e config bugfix
    0ac567a76 Merge pull request silx-kit#45 from szcompressor/hdf5
    d6beca327 add config support to hdf5 filter
    05965ac2b update 1d lorenzo fast mode
    d2a03eae4 add lorenzo 1D fast mode
    fa9a7f179 Merge pull request silx-kit#44 from szcompressor/namespace
    2437574dc change namespace from SZ to SZ3, to avoid conflict with SZ2
    3236a6eb2 Merge branch 'huffman'
    5995fa9f2 update HDF5 filter
    1fc15171c update HDF5 filter
    aadaaeb90 change namespace from SZ to SZ3, to avoid conflict with SZ2
    e1af6bea2 change namespace from SZ to SZ3, to avoid conflict with SZ2
    bdc4b503b new huffman
    9aee288dd Merge pull request silx-kit#43 from mrmbernardi/decompress_output
    ab7896ec4 update stateNum in preprocess_encode
    44839697c Decompress function returns output matching original_dtype
    f420554d3 update readme
    31d7cbb6a add annotation for interfaces
    d0606d3ae Merge pull request silx-kit#41 from szcompressor/mdz
    3443ae347 update readme
    1219a336d disable SZ3_DEBUG_TIMINGS by default
    09d43dee5 clear runtime output for MDZ
    f051a8361 support 3D input for MDZ
    89f3b7c78 bugfix in smoke test
    5a1cf1aad Merge remote-tracking branch 'origin/master'
    40e9b3de5 bugfix in smoke test
    140e09e9c remove the print information (OpenMP threads = ), which might be annoying and seems unneeded.
    1e1dc102e Merge pull request silx-kit#38 from aumuell/uint8
    9b2bf8ad5 fix missing uint8_t with GCC 13
    f7d865e6e Merge pull request silx-kit#37 from robertu94/hdf5_fix
    73674f3db link to MPI when hdf5 is parallel
    13f835d54 openmp bugfix
    318fe953f openmp bugfix
    612b4993d update pysz
    bce7f1202 Merge pull request silx-kit#32 from exmakhina/master
    62d01de0b python: load library from a sensible default path, if not provided
    ce7fb031e change sprintf to snprintf
    1b1abcf39 interp+lorenzo sampling bugfix
    9f396935d bugfix
    
    git-subtree-dir: src/SZ3
    git-subtree-split: b3dab4018425803a55d8073dc55dade7fa46b7b4
    t20100 committed Aug 27, 2024
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  14. simplify include dirs

    t20100 committed Aug 27, 2024
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