add CondaPkg.toml for default env #979
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI-examples | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| on: | |
| # Trigger the workflow on push to master or pull request | |
| # to be merged in master | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| branches: | |
| - master | |
| jobs: | |
| list-examples: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| outputs: | |
| matrix: ${{ steps.set-matrix.outputs.matrix }} | |
| steps: | |
| - name: Checkout JUDI | |
| uses: actions/checkout@v4 | |
| - id: set-matrix | |
| run: echo "matrix=$(ls examples/scripts/*.jl examples/machine-learning/*.jl | xargs -n 1 | jq -R -s -c 'split("\n")[:-1]')" >> $GITHUB_OUTPUT | |
| shell: bash | |
| run-examples: | |
| runs-on: ubuntu-latest | |
| needs: list-examples | |
| name: ${{ matrix.example }} | |
| env: | |
| DEVITO_ARCH: gcc-12 | |
| DEVITO_LANGUAGE: "openmp" | |
| DEVITO_LOGGING: "ERROR" | |
| OMP_NUM_THREADS: 1 | |
| JULIA_NUM_THREADS: 1 | |
| NITER: 2 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| example: ${{ fromJson(needs.list-examples.outputs.matrix) }} | |
| version: ['1'] | |
| steps: | |
| - name: Checkout JUDI | |
| uses: actions/checkout@v4 | |
| - name: Setup julia | |
| uses: julia-actions/setup-julia@v2 | |
| with: | |
| version: ${{ matrix.version }} | |
| arch: x64 | |
| - uses: julia-actions/cache@v2 | |
| - name: Set julia python | |
| run: | | |
| python3 -m pip install -U pip | |
| python3 -m pip install "matplotlib<3.9" seiscm colorcet | |
| echo "JULIA_PYTHONCALL_EXE=$(which python3)" >> $GITHUB_ENV | |
| echo "JULIA_CONDAPKG_BACKEND=Null" >> $GITHUB_ENV | |
| echo "PYTHON=$(which python3)" >> $GITHUB_ENV | |
| echo "PYCALL_JL_RUNTIME_PYTHON=$(which python3)" >> $GITHUB_ENV | |
| - name: Build JUDI | |
| uses: julia-actions/julia-buildpkg@latest | |
| - name: Install packages | |
| run: | | |
| julia -e 'using Pkg;Pkg.add(["SlimPlotting", "PythonPlot", "NLopt", "Flux", "JOLI", "Zygote", "IterativeSolvers", "SlimOptim", "HDF5", "SegyIO", "SetIntersectionProjection"])' | |
| julia -e 'using Pkg; Pkg.develop(PackageSpec(path=pwd()))' | |
| - name: Run examples | |
| run: julia -p 2 -t 1 ${{ matrix.example }} |