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New translations 05-differential-expression.md (Japanese)
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kozo2 committed May 13, 2024
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### Load data

Let's load in our `SummarizedExperiment` object again. In the last episode for quality control exploration, we removed \~35% genes that had 5 or fewer counts because they had too little information in them. For DESeq2 statistical analysis, we do not technically have to remove these genes because by default it will do some independent filtering, but it can reduce the memory size of the `DESeqDataSet` object resulting in faster computation. Plus, we do not want these genes cluttering up some of the visualizations.
Let's load in our `SummarizedExperiment` object again. In the last episode for quality control exploration, we removed ~35% genes that had 5 or fewer counts because they had too little information in them. For DESeq2 statistical analysis, we do not technically have to remove these genes because by default it will do some independent filtering, but it can reduce the memory size of the `DESeqDataSet` object resulting in faster computation. Plus, we do not want these genes cluttering up some of the visualizations.

```{r read-se}
se <- readRDS("data/GSE96870_se.rds")
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