CAGE-sequencing analysis pipeline with trimming, alignment and counting of CAGE tags.
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Updated
May 9, 2024 - Nextflow
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cageseq-data
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Scripts for the complete analysis pipeline: 1) generation of the count table; 2) annotation of the count-table and differential gene expression analysis; 3) Weighted Gene Coexpression Network Analysis; and, 4) the functional annotation (hypergeometric test) of the hits.
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Updated
May 4, 2018 - R
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