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First database established with DeepCell Datasets #45

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merged 19 commits into from
Oct 13, 2020
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Commits on Aug 18, 2020

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Commits on Aug 19, 2020

  1. begin updating data models

    MekWarrior committed Aug 19, 2020
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Commits on Aug 24, 2020

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Commits on Sep 11, 2020

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Commits on Sep 15, 2020

  1. Add blueprints for Training Data API and Views. (#42)

    * define the sample form classes without model_form, and re-implement validate_on_submit.
    * use a field macro for easier field rendering in the HTML template.
    * Update ExperimentForm from defined wtform classes.
    * Undo name change in SampleForm
    * delete old code that is trying to be rendered.
    * use a for loop to render the radio list choices dynamically.
    * paginated experiments table at GET /experiments
    * fix misnamed ExperimentForm
    * add experiment-detail template
    * wrap class in quotes.
    * Added new module/blueprints for Trainin_Data collection
    * Update tests for training data routes
    * register the new training blueprints
    * fix some blueprint issues due to bad copy/paste
    * remove header for link
    * slightly improve display for training detail view.
    * Bugfixes.
    * move fixtures into conftest and use the experiment fixture in the samples API tests.
    * Now that `Experiment` is required on the `Samples`, we need to make sure there is an Experiment in the DB before creating any Sample.
    * PEP8 whitespace
    * renamed templates
    willgraf authored Sep 15, 2020
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Commits on Sep 17, 2020

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Commits on Sep 21, 2020

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Commits on Sep 25, 2020

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  2. fix bp reference

    MekWarrior committed Sep 25, 2020
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Commits on Sep 27, 2020

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Commits on Sep 28, 2020

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  3. Update table views and add a Sample view filterable by experiment (#43)

    * add ITEMS_PER_PAGE as a configuration setting, fetch it during pagination.
    * fix experiment-detail template
    * add table for all samples
    * add button to experiment-detail to view all samples for a given experiment
    * Uses filters based on URL params!
    * PEP8
    willgraf authored Sep 28, 2020
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Commits on Oct 6, 2020

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Commits on Oct 12, 2020

  1. Enable filtering of queries based on white-listed fields. (#47)

    * whitelist attribute names to filter on.
    * Filtering using URL args is working.
    * refactor experiments_table to view_all_experiments, to better match other blueprints.
    * build forms for samples and training.
    * Pass parsed URL kwargs to the template.
    * Template filter forms using FlaskForms.
    * PEP8
    willgraf authored Oct 12, 2020
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