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Improve github CIs #182

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merged 3 commits into from
May 30, 2024
Merged

Improve github CIs #182

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e8ace8f
run publish on 3.11 and check befor eupload
mscheltienne May 30, 2024
838d16e
run stubs on 3.11
mscheltienne May 30, 2024
f63cabc
make dataset caching DRY
mscheltienne May 30, 2024
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22 changes: 22 additions & 0 deletions .github/actions/get-testing-dataset/action.yaml
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Original file line number Diff line number Diff line change
@@ -0,0 +1,22 @@
name: "Get MNE testing dataset"
description: "A composite action to get MNE testing dataset from cache or remote."

runs:
using: "composite"
steps:
- name: Get testing dataset version
shell: bash
run: curl https://raw.githubusercontent.com/mne-tools/mne-testing-data/master/version.txt -o mne_testing_data_version.txt
- name: Cache testing dataset
id: cache
uses: actions/cache@v4
with:
key: mne-testing-${{ runner.os }}-${{ hashFiles('mne_testing_data_version.txt') }}
path: ~/mne_data
- name: Download testing dataset
if: steps.cache.outputs.cache-hit != 'true'
shell: bash
run: python -c "import mne; mne.datasets.testing.data_path(verbose=True)"
- name: Remove dataset version file
shell: bash
run: rm mne_testing_data_version.txt
6 changes: 3 additions & 3 deletions .github/workflows/publish.yaml
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Expand Up @@ -12,11 +12,10 @@ jobs:
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Setup Python 3.9
- name: Setup Python 3.11
uses: actions/setup-python@v5
with:
python-version: '3.9'
architecture: 'x64'
python-version: 3.11
- name: Install dependencies
run: |
python -m pip install --progress-bar off --upgrade pip setuptools
Expand All @@ -31,4 +30,5 @@ jobs:
TWINE_PASSWORD: ${{ secrets.PYPI_API_TOKEN }}
run: |
python -m build
twine check dist/*
twine upload dist/*
32 changes: 4 additions & 28 deletions .github/workflows/pytest.yaml
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Expand Up @@ -38,20 +38,8 @@ jobs:
run: pycrostates-sys_info --developer
- name: Display MNE info
run: mne sys_info -pd
- name: Get testing dataset version
run: |
curl https://raw.githubusercontent.com/mne-tools/mne-testing-data/master/version.txt -o mne_testing_data_version.txt
- name: Cache testing dataset
id: cache
uses: actions/cache@v4
with:
key: mne-testing-${{ runner.os }}-${{ hashFiles('mne_testing_data_version.txt') }}
path: ~/mne_data
- name: Download testing dataset
if: steps.cache.outputs.cache-hit != 'true'
run: python -c "import mne; mne.datasets.testing.data_path(verbose=True)"
- name: Remove dataset version file
run: rm mne_testing_data_version.txt
- name: Get testing dataset
uses: ./.github/actions/get-testing-dataset
- name: Run pytest
run: pytest pycrostates --cov=pycrostates --cov-report=xml --cov-config=pyproject.toml
- name: Upload to codecov
Expand Down Expand Up @@ -93,20 +81,8 @@ jobs:
run: pycrostates-sys_info --developer
- name: Display MNE info
run: mne sys_info -pd
- name: Get testing dataset version
run: |
curl https://raw.githubusercontent.com/mne-tools/mne-testing-data/master/version.txt -o mne_testing_data_version.txt
- name: Cache testing dataset
id: cache
uses: actions/cache@v4
with:
key: mne-testing-${{ runner.os }}-${{ hashFiles('mne_testing_data_version.txt') }}
path: ~/mne_data
- name: Download testing dataset
if: steps.cache.outputs.cache-hit != 'true'
run: python -c "import mne; mne.datasets.testing.data_path(verbose=True)"
- name: Remove dataset version file
run: rm mne_testing_data_version.txt
- name: Get testing dataset
uses: ./.github/actions/get-testing-dataset
- name: Run pytest
run: pytest pycrostates --cov=pycrostates --cov-report=xml --cov-config=pyproject.toml
- name: Upload to codecov
Expand Down
5 changes: 2 additions & 3 deletions .github/workflows/stubs.yaml
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Expand Up @@ -18,11 +18,10 @@ jobs:
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Setup Python 3.9
- name: Setup Python 3.11
uses: actions/setup-python@v5
with:
python-version: 3.9
architecture: 'x64'
python-version: 3.11
- name: Install package
run: |
python -m pip install --progress-bar off --upgrade pip setuptools
Expand Down
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