Submit simulator version from GHCR to BioSimulators #80
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| name: Submit simulator version from GHCR to BioSimulators | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| tag_name: | |
| description: 'version tag' | |
| required: true | |
| default: 7.4.0.23 | |
| jobs: | |
| submit: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| # Submit to BioSimulators registry | |
| - name: Submit to BioSimulators registry | |
| run: | | |
| set -ux | |
| export SPEC_URL=https://github.com/${{ github.repository }}/releases/download/${{ github.event.inputs.tag_name }}/biosimulators.json | |
| docker pull ghcr.io/virtualcell/biosimulators_vcell:${{ github.event.inputs.tag_name }} | |
| IMAGE_DIGEST=$(docker image inspect ghcr.io/virtualcell/biosimulators_vcell:${{ github.event.inputs.tag_name }} | jq -r '.[0].RepoDigests[0]' | cut -d "@" -f 2-) | |
| curl \ | |
| -X POST \ | |
| -u ${{ secrets.ACTION_USER }}:${{ secrets.ACTION_TOKEN }} \ | |
| -H "Accept: application/vnd.github.v3+json" \ | |
| https://api.github.com/repos/biosimulators/Biosimulators/issues \ | |
| -d "{\"labels\": [\"Validate/submit simulator\"], \"title\": \"Submit VCell ${{ github.event.inputs.tag_name }}\", \"body\": \"---\nid: vcell\nversion: ${{ github.event.inputs.tag_name }}\nspecificationsUrl: $SPEC_URL\nspecificationsPatch:\n version: ${{ github.event.inputs.tag_name }}\n image:\n url: ghcr.io/virtualcell/biosimulators_vcell:${{ github.event.inputs.tag_name }}\n digest: \\\"${IMAGE_DIGEST}\\\"\nvalidateImage: true\ncommitSimulator: true\n\n---\"}" |