Skip to content

yerkoescalona/structural_bioinformatics

Repository files navigation

logo

Structural Bioinformatics (W2024)

Teaching materials for the course "Structural Bioinformatics" at FHWN.

Getting started

After some research, Google Colab is the best option.

Google Colab

Google colab is a free service that allows you to run jupyter notebooks in the cloud.

Link Description
Open In Colab Exercise 00: Crash course for Bio Data Scientists
Open In Colab Exercise 01: Exploring and Analyzing Protein Structures in the PDB Database
Open In Colab Exercise 02: Protein Structure and Modeling

Conda

You are free to use the files

For Linux, Mac or Windows (via WSL).

  1. Create a new environment with conda:

    conda env create -f environment.yml

    This will create an environment called structbioinfo.

  2. Activate the environment:

    conda activate structbioinfo
  3. Update the environment for upcoming modifications:

    conda activate structbioinfo
    conda env update --file environment.yml --prune
  4. In VSCode, select the interpreter to the one you just created.

License

BY-NC-SA

This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.

About

No description, website, or topics provided.

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published