Current stockholm master (to compare with) #170
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Create stage_docker_push.yml
Change main to master in docker workflow
db config tweak: host+port->URI & split gens/scout
Fixes parse_bed to use csv.DictReader correctly
Fixes the list of expected database config vars
Fixes io operation on closed file error
Replaces deprecated mongodb 'remove' function
Replaces deprecated/removed mongodb functions
Adds parsing support for common .bed column names
Adds gunicorn default command to dockerfile
Adds docker build and push for master branch
Adds --chdir to gunicorn command
Changes to accurately reflect Gens' WSGI setup
Adds case name as an additional database field
Adds case name to most, if not all, places needed
…e-a-typo 81 worlds smallest issue a typo
…iption-text-in-view-not-only-on-variant Center variant description text in view, not only on variant
Merge updates from lund
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No need, can difftool directly to the remote repo |
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This PR adds a functionality or fixes a bug.
OR
This PR marks a new Gens release. We apply semantic versioning. This is a major/minor/patch release for reasons.
How to test:
Expected outcome:
The functionality should be working
Take a screenshot and attach or copy/paste the output.
Review: