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Add sequencing artifact manager #407

Merged
merged 31 commits into from
Aug 3, 2023
Merged

Add sequencing artifact manager #407

merged 31 commits into from
Aug 3, 2023

Commits on Jul 27, 2023

  1. #397: Add sequencing artifact manager

    @seallard
    seallard committed Jul 27, 2023
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  2. Fix tests

    @seallard
    seallard committed Jul 27, 2023
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  3. Sort inputs

    @seallard
    seallard committed Jul 27, 2023
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  4. Fix error message

    @seallard
    seallard committed Jul 27, 2023
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  5. Fix formatting

    @seallard
    seallard committed Jul 27, 2023
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  6. Extract SampleArtifacts class

    @seallard
    seallard committed Jul 27, 2023
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  7. Add test for get_sample_artifacts

    @seallard
    seallard committed Jul 27, 2023
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Commits on Jul 28, 2023

  1. Extract lane artifacts

    @seallard
    seallard committed Jul 28, 2023
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  2. Fix sample artifact extraction

    @seallard
    seallard committed Jul 28, 2023
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  3. Fix tests

    @seallard
    seallard committed Jul 28, 2023
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  4. Fix naming

    @seallard
    seallard committed Jul 28, 2023
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  5. Fix readability

    @seallard
    seallard committed Jul 28, 2023
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  6. Fix return type

    @seallard
    seallard committed Jul 28, 2023
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  7. Improve readability

    @seallard
    seallard committed Jul 28, 2023
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  8. Merge branch 'master' into 397-add-sequencing-artifact-manager

    @seallard
    seallard committed Jul 28, 2023
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  9. Use enums

    @seallard
    seallard committed Jul 28, 2023
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  10. Use udf enum

    @seallard
    seallard committed Jul 28, 2023
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  11. Fix indentation

    @seallard
    seallard committed Jul 28, 2023
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  12. Assert artifacts are returned

    @seallard
    seallard committed Jul 28, 2023
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  13. Remove doc string

    @seallard
    seallard committed Jul 28, 2023
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  14. Move enum

    @seallard
    seallard committed Jul 28, 2023
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  15. Move extraction of sample id

    @seallard
    seallard committed Jul 28, 2023
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  16. Fix formatting

    @seallard
    seallard committed Jul 28, 2023
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  17. Add class doc strings

    @seallard
    seallard committed Jul 28, 2023
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  18. Fix parameter

    @seallard
    seallard committed Jul 28, 2023
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Commits on Aug 1, 2023

  1. Merge branch 'master' into 397-add-sequencing-artifact-manager

    @seallard
    seallard authored Aug 1, 2023
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  2. Fix test

    @seallard
    seallard committed Aug 1, 2023
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Commits on Aug 2, 2023

  1. linting with black

    @Karl-Svard
    Karl-Svard committed Aug 2, 2023
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  2. refactored some function and variable names

    @Karl-Svard
    Karl-Svard committed Aug 2, 2023
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  3. moved test

    @Karl-Svard
    Karl-Svard committed Aug 2, 2023
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Commits on Aug 3, 2023

  1. Add constant for artifact key

    @seallard
    seallard committed Aug 3, 2023
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