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MicrobialGenomics-IrsicaixaOrg

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  1. dar dar Public

    dar: runs multiple differential abundance analysis methods and through a consensus strategy returns a set of differentially abundant features.

    R 1

  2. ViCroSeq ViCroSeq Public

    A tool for the removal of Viral Cross-Contamination in Sequencing - ViCroSeq

    Shell

  3. TTrichiura_Tubulin TTrichiura_Tubulin Public

    Pipeline to analyze beta-tubulin gene of Trichuris Trichiura, and call nucleotide and amino acid mutations on coding and non-coding regions, separately

    Nextflow

  4. HLA_Analysis HLA_Analysis Public

    R

  5. 2022_MedCars 2022_MedCars Public

    HTML

  6. modules modules Public

    Forked from nf-core/modules

    Repository to host tool-specific module files for the Nextflow DSL2 community!

    Nextflow

Repositories

Showing 10 of 12 repositories
  • gemmicroflow Public

    MicroFlow Analyzer is a Nextflow-based pipeline for comprehensive microbiome FASTQ analysis. It integrates taxonomic profiling, functional annotation, Integrated Gene Catalog (IGC) analysis, and Metagenome-Assembled Genomes (MAGs) reconstruction.

    MicrobialGenomics-IrsicaixaOrg/gemmicroflow’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Nov 9, 2024
  • dar Public

    dar: runs multiple differential abundance analysis methods and through a consensus strategy returns a set of differentially abundant features.

    MicrobialGenomics-IrsicaixaOrg/dar’s past year of commit activity
    R 1 0 0 1 Updated Oct 16, 2024
  • microfunk Public
    MicrobialGenomics-IrsicaixaOrg/microfunk’s past year of commit activity
    R 0 GPL-3.0 0 3 2 Updated Jul 15, 2024
  • Lamivudine_mice_RNAseq Public
    MicrobialGenomics-IrsicaixaOrg/Lamivudine_mice_RNAseq’s past year of commit activity
    0 0 0 0 Updated Jan 22, 2024
  • mistralDP Public
    MicrobialGenomics-IrsicaixaOrg/mistralDP’s past year of commit activity
    R 0 0 4 0 Updated Nov 9, 2023
  • modules Public Forked from nf-core/modules

    Repository to host tool-specific module files for the Nextflow DSL2 community!

    MicrobialGenomics-IrsicaixaOrg/modules’s past year of commit activity
    Nextflow 0 MIT 722 0 0 Updated Oct 4, 2023
  • ivihome Public

    MISTRAL Data Portal

    MicrobialGenomics-IrsicaixaOrg/ivihome’s past year of commit activity
    R 0 0 0 0 Updated Aug 22, 2023
  • test-datasets Public Forked from nf-core/test-datasets

    Test data to be used for automated testing with the nf-core pipelines

    MicrobialGenomics-IrsicaixaOrg/test-datasets’s past year of commit activity
    0 MIT 353 0 0 Updated Jan 30, 2023
  • 2022_MedCars Public
    MicrobialGenomics-IrsicaixaOrg/2022_MedCars’s past year of commit activity
    HTML 0 0 0 0 Updated Oct 10, 2022
  • HLA_Analysis Public
    MicrobialGenomics-IrsicaixaOrg/HLA_Analysis’s past year of commit activity
    R 0 0 0 0 Updated Apr 1, 2022
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