Process completed with exit code 1.

--- re-building ‘article.Rmd’ using rmarkdown

processing vignette 'article.Rmd' failed with diagnostics:

Vignette re-building failed.

Failed to install 'dar' from local:

Process completed with exit code 1.

Process completed with exit code 1.

unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-x86_64/contrib/4.4:

The vignette title specified in \VignetteIndexEntry{} is different from the title in the YAML metadata. The former is "Data Import", and the latter is "Converting Common Data Formats to Phyloseq and TreeSummarizedExperiment". If that is intentional, you may set options(rmarkdown.html_vignette.check_title = FALSE) to suppress this check.

unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-x86_64/contrib/4.4:

unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-x86_64/contrib/4.4:

Unused dummy argument ‘itry’ at (1) [-Wunused-dummy-argument]

Unused variable ‘t4’ declared at (1) [-Wunused-variable]

Unused variable ‘t5’ declared at (1) [-Wunused-variable]

‘t2’ may be used uninitialized [-Wmaybe-uninitialized]

‘i2’ may be used uninitialized [-Wmaybe-uninitialized]

Unused dummy argument ‘a’ at (1) [-Wunused-dummy-argument]

Unused variable ‘i’ declared at (1) [-Wunused-variable]

Unused dummy argument ‘idigit’ at (1) [-Wunused-dummy-argument]

unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-x86_64/contrib/4.4:

unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-x86_64/contrib/4.4:

unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-x86_64/contrib/4.4:

unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-x86_64/contrib/4.4: