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WIP do not merge yet : ideal methylation pipeline #1

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WIP do not merge yet : ideal methylation pipeline #1

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4ad4ce0
skeleton of ideal methylation pipeline
bwlang Aug 18, 2020
5eb2f7f
Basically functional script now
mattsoup Oct 8, 2020
eedfac2
Adding convert reads script
mattsoup Nov 17, 2020
3bdce99
Working on speeding up the pipeline
mattsoup Mar 16, 2021
c20e7f0
Should keep processes dealing with little data until near the end
mattsoup Mar 16, 2021
dc7ad64
More changes for efficiency
mattsoup Mar 18, 2021
4c4c285
Using merge rather than cat
mattsoup Mar 18, 2021
903462e
To avoid file name overlaps
mattsoup Mar 19, 2021
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