Increase compute resources #4

	# Adapted from https://github.com/nf-core/demultiplex/blob/17cde5d8f22f5327beac9637e941e4775ada1b3f/.github/workflows/ci.yml
	name: Run nf-test

	on:
	push:
	pull_request:

	env:
	NXF_VER: 24.04.1
	NXF_ANSI_LOG: false
	NFT_VER: "0.9.0"
	NFT_WORKDIR: "~"
	NFT_DIFF: "pdiff"
	NFT_DIFF_ARGS: "--line-numbers --expand-tabs=2"

	jobs:
	test:
	name: Run nf-tests and pipeline
	runs-on: "ubuntu-24.04"
	steps:
	- name: Check out pipeline code
	uses: actions/checkout@v4

	- uses: actions/setup-python@v4
	with:
	python-version: "3.11"

	- name: Install pdiff to see diff between nf-test snapshots
	run: \|
	python -m pip install --upgrade pip
	pip install pdiff

	- name: Install Nextflow
	uses: nf-core/setup-nextflow@v2
	with:
	version: "${{ env.NXF_VER }}"

	- uses: nf-core/setup-nf-test@v1
	with:
	version: ${{ env.NFT_VER }}

	- name: Run Tests
	run: \|
	nf-test test --ci

	- name: Run pipeline with test data
	run: \|
	nextflow run ${GITHUB_WORKSPACE} -profile test

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