update call to program

Molmed · May 16, 2024 · 9a8808a · 9a8808a
1 parent a497e9a
commit 9a8808a
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/metadata_service/process.py b/metadata_service/process.py
@@ -66,12 +66,12 @@ def export_runfolder_metadata(self, runfolder_extract, snpseq_data_extract, outd
                   f"--outdir {outdir} " \
                   f"{runfolder_extract} " \
                   f"{snpseq_data_extract} " \
-                  f"xml"
+                  f"xml tsv"
         self.run_process(cmdline)
         return [
             os.path.join(
                 outdir,
                 xmlfile)
             for xmlfile in os.listdir(outdir)
-            if xmlfile.endswith(".xml")
+            if xmlfile.endswith(".xml") or xmlfile.endswith(".tsv")
         ]