Add conda canary CI job #903
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| name: "conda_cron" | ||
| on: | ||
| workflow_dispatch: | ||
| pull_request: | ||
| branches: | ||
| - main | ||
| push: | ||
| branches: | ||
| - main | ||
| schedule: | ||
| # At 07:00 UTC every day | ||
| - cron: "0 7 * * *" | ||
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| concurrency: | ||
| group: "${{ github.workflow }}-${{ github.ref }}" | ||
| cancel-in-progress: true | ||
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| defaults: | ||
| run: | ||
| shell: bash -l {0} | ||
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| jobs: | ||
| condacheck: | ||
| runs-on: ${{ matrix.OS }} | ||
| name: "daily conda check" | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| os: ['ubuntu-latest', 'macos-latest', 'macos-12'] | ||
| python-version: | ||
| - "3.9" | ||
| - "3.10" | ||
| - "3.11" | ||
| - "3.12" | ||
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| steps: | ||
| - name: Setup Micromamba | ||
| uses: mamba-org/setup-micromamba@v1 | ||
| with: | ||
| environment-name: openfe | ||
| create-args: >- | ||
| python=${{ matrix.python-version }} | ||
| pip | ||
| condarc: | | ||
| channels: | ||
| - jaimergp/label/unsupported-cudatoolkit-shim | ||
| - conda-forge | ||
| init-shell: bash | ||
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| - name: "Install openfe + optional deps" | ||
| run: | | ||
| micromamba install openfe pytest -c conda-forge | ||
| python -m pip install pytest-xdist PyGithub | ||
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There was a problem hiding this comment. o that was just me being silly wanting to do something else |
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| - name: "env info" | ||
| run: | | ||
| micormamba info | ||
| micromamba list | ||
| pip list | ||
| ls /Users/runner/micromamba/envs/openfe/lib/python*/site-packages/openfe/tests/data/lomap_basic/ | ||
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| - id: run-tests | ||
| name: "Run tests" | ||
| run: | | ||
| # note: this only runs the fast tests | ||
| pytest -n auto --pyargs openfe openfecli | ||
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There was a problem hiding this comment. I'm relying on a normal failure here rather than raising the issue as we do with gufe. The plan will be to hook up Swenson's cron job checker tool. |
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remove this once CI runs