Merge pull request #40 from clinical-genomics-uppsala/update_multiqc_… #94

	name: pycodestyle

	# Controls when the action will run.
	on:
	# Triggers the workflow on push or pull request events but only for the master and develop branch
	push:
	branches:
	- develop
	- main
	pull_request:
	branches:
	- develop
	- main

	# Allows you to run this workflow manually from the Actions tab
	workflow_dispatch:

	jobs:
	pycodestyle:
	name: pycodestyle
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v3
	- name: Set up Python 3.8
	uses: actions/setup-python@v4
	with:
	python-version: 3.8
	- name: Add conda to system path
	run: \|
	echo $CONDA/bin >> $GITHUB_PATH
	- name: Install dependencies
	run: \|
	conda install -c conda-forge mamba
	- name: Install requirements.txt
	run: \|
	pip install -r requirements.txt
	- name: Install requirements.test.txt
	run: \|
	pip install -r requirements.test.txt
	- name: Check python syntax lib
	run: pycodestyle --max-line-length=130 --statistics workflow/scripts

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