style: Update common.smk

clinical-genomics-uppsala · Feb 28, 2024 · e7de30f · e7de30f
1 parent 825b71c
commit e7de30f
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/workflow/rules/common.smk b/workflow/rules/common.smk
@@ -185,10 +185,10 @@ def compile_output_list(wildcards):
     for output in output_json:
         if output == "results/{sample}/{sample}.upd_regions.bed":
             for sample in samples[samples.trio_member == "proband"].index:
-                proband_trio_id =  samples[samples.index == sample].trioid.iloc[0]
+                proband_trio_id = samples[samples.index == sample].trioid.iloc[0]
                 trio_num = samples[samples.trioid == proband_trio_id].shape[0]
                 if trio_num != 3:
-                        continue
+                    continue
                 else:
                     output_files.append(output.format(sample=sample))
         else: