Merge pull request #440 from genomic-medicine-sweden/svdb_skip_merging

feat: do not merge regions that are not identical
genomic-medicine-sweden · Apr 19, 2024 · 1a3bdca · 1a3bdca
2 parents 59a7e89 + 1d9a027
commit 1a3bdca
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/config/config.yaml b/config/config.yaml
@@ -331,6 +331,7 @@ svdb_merge:
       cnv_caller:
         - cnvkit
         - gatk
+  overlap: 1 #Just merge the two vcf-files without merging regions
   extra: "--pass_only" #Just merge the two vcf-files without merging regions
 
 svdb_query: