fix: updated common to fix VEP bug

genomic-medicine-sweden · Nov 6, 2024 · 8ac22b6 · 8ac22b6
1 parent bbbb731
commit 8ac22b6
Show file tree

Hide file tree

Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/config/config.yaml b/config/config.yaml
@@ -5,7 +5,7 @@ units: "units.tsv"
 #hydra_local_path: "PATH_TO_REPO"
 
 output: "config/output_files.yaml"
-default_container: "docker://hydragenetics/common:3.1.0"
+default_container: "docker://hydragenetics/common:3.1.1"
 
 trimmer_software: "fastp_pe"
 

diff --git a/requirements.txt b/requirements.txt
@@ -1,4 +1,4 @@
-hydra-genetics==3.1.0
+hydra-genetics==3.1.1
 pandas>=1.3.1
 snakemake==7.18.0
 singularity==3.0.0

diff --git a/workflow/schemas/singularity.schema.yaml b/workflow/schemas/singularity.schema.yaml
@@ -6,7 +6,7 @@ properties:
     type: string
     description: name or path to a default docker/singularity container
     pattern: >-
-        hydragenetics/common:3\.0\.0$|hydragenetics_common_3\.0\.0\.sif$|
+        hydragenetics/common:3\.1\.1$|hydragenetics_common_3\.1\.1\.sif$|
 
   bcbio_variation_recall_ensemble:
     type: object