ampliCNV is a Python 3.x package for copy number variation (CNV) detection on whole exome sequencing (WES) data from amplicon-based enrichment technologies.
pip3 install amplicnv
ampliCNV was designed to please three kind of people: those familiar with coding, those more comfortable with user friendly programs, and those who fit both styles. Check out ampliCNV's documentation to get started.