Adjust one internal parameter

liulab-dfci · Dec 9, 2022 · 83a632d · 83a632d
1 parent 36ffe8a
commit 83a632d
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/main.cpp b/main.cpp
@@ -902,7 +902,7 @@ int main( int argc, char *argv[] )
 		}
 
 		bool mayTrim = false ;
-		if ( gidx == 3 && geneOverlap[3].seqStart < indexKmerLength && geneOverlap[3].similarity > 0.95 )
+		if ( gidx == 3 && geneOverlap[3].seqStart < 9 && geneOverlap[3].similarity > 0.95 )
 				//&& geneOverlap[3].readEnd + indexKmerLength >= sortedReads[i].len 
 				//&& refSet.GetSeqName( geneOverlap[3].seqIdx )[2] != 'H' )
 			mayTrim  = true ;

diff --git a/run-trust4 b/run-trust4
@@ -7,7 +7,7 @@ use Cwd 'cwd' ;
 use Cwd 'abs_path' ;
 use File::Basename ;
 
-die "TRUST4 v1.0.8-r424 usage: ./run-trust4 [OPTIONS]:\n".
+die "TRUST4 v1.0.8-r425 usage: ./run-trust4 [OPTIONS]:\n".
     "Required:\n".
     #"\t[Input]:\n".
     "\t-b STRING: path to bam file\n".