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M-SIS: Microsoft-Stage Integration Software

fast, easy, robust

M-SIS facilitates the acquisition of tomogram/tilt series with a two-buttons philosophy:

  • One button to set up;
  • One button to start automated acquisition.

Works for now with ThermoFisher microscopes running Autoscript and Smaract MCS-3D controllers.

Features

  • Auto eucentric setting, user-independent
  • Auto tomogram acquisition:
    • No manual beam correction
    • No manual focus correction
    • No manual displacement correction
  • Simultaneous multi-modes acquisition: SE, BF, DF, HAADF

Authors

Acknowledgements

Appendix

Any additional information goes here

Screenshots

MSIS Screenshot

Roadmap

  • Asynchronous communication for microscope functions

License

MIT

Installation

For now, copy files in a directory and launch main.py with Python.

In future updates:

Install my-project with pip

  pip install msis

Documentation

Documentation

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