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funannotate v1.3.2
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@nextgenusfs nextgenusfs released this 19 May 14:25
· 664 commits to master since this release
1.3.2
c32453b
  • added several utility scripts --> accessible by funannotate util submenu. This includes funannotate util compare which will compare multiple annotations to a reference.
$ funannotate util

Usage:       funannotate util <arguments>
version:     1.3.2
    
Commands:    compare        Compare annotations to reference (GFF3 or GBK annotations)
             tbl2gbk        Convert TBL format to GenBank format
             gbk2parts      Convert GBK file to individual components
             gff2proteins   Convert GFF3 + FASTA files to protein FASTA
             gff2tbl        Convert GFF3 format to NCBI annotation table (tbl)
  • bug fix for funannotate remote moving logfile
  • bug fix for mapping proteins to genome where tmp folder wasn't being properly removed
  • run GO enrichment in parallel in funannotate compare
  • update colors in some graphs from funannotate compare to 24-pack Crayola colors
  • add option to use iqtree to draw ML phylogeny in funannotate compare
  • bug fix for funannotate database command where it was not displaying table correctly.
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