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1. D-SCRIPT D-SCRIPT Public

   A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions

   Jupyter Notebook 89 18

2. ConPLex ConPLex Public

   Adapting protein language models and contrastive learning for highly-accurate drug-target interaction prediction.

   Python 125 34

3. TreeFix-TP TreeFix-TP Public

   Phylogenetic error correction using a transmission-aware cost function

   C 2

4. suz11001/virDTL suz11001/virDTL Public

   Jupyter Notebook 2

5. philharmonic philharmonic Public

   Decoding the functional networks of non-model organisms

   Jupyter Notebook 5

6. microsoft/peft_proteomics microsoft/peft_proteomics Public

   LoRA for protein language models

   Jupyter Notebook 31 2