v2.1.1

2.1.1 (2024-08-19)

Bug Fixes

• use bioconda package for cyrcular 0.3.0 (b2ba7cb)

v2.1.0

2.1.0 (2024-04-08)

Features

• allow for all caps platform specification (d9e8cc2)

Bug Fixes

• further pandas syntax fixes (f2f3f51)
• more pandas syntax updates (cacc2b1)
• query syntax for lower-casing platform entries in samples.tsv (70faa09)
• remove benchmark directive from any rules with cache directive (f405a32)
• revert unnecessary syntax change (05316e2)
• try always lowercasing platform after getting it from samples table (f627736)

v2.0.0

Major overhaul of the workflow, especially improving the interactive reporting, adding CI testing, updating wrappers and conda environment definitions, cleaner reference download, activation of release-please (using conventional commits), adding a CITATION.cff and lots of little improvements. For details, see #8 .

v1.1.0

• Update cyrcular to v0.2.0:
  • graph representation now uses a left-to-right layout
  • edge width corresponds to mean read depth
  • edges are merged into single bi-directional edges where applicable to reduce visual clutter
• Fix inconsistent annotations of circle length and number of segments
• Address snakemake lints