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Citationtools

Citationtools #874

GitHub Actions / JUnit Test Report failed Oct 17, 2023 in 0s

4 tests run, 0 passed, 0 skipped, 4 failed.

Annotations

Check failure on line 1 in Bwameth Single-End

See this annotation in the file changed.

@github-actions github-actions / JUnit Test Report

Bwameth Single-End 

java.nio.file.NoSuchFileException: /home/runner/work/methylseq/methylseq/.nf-test/tests/bd398dfb432492c55351d70617e5f74d/output/bwameth/reference_genome/bwameth
Raw output 
Nextflow stdout:

ERROR ~ BUG! exception in phase 'semantic analysis' in source unit 'Script_ec4b4a6a81036f9f' The lookup for WorkflowMethylseq caused a failed compilation. There should not have been any compilation from this call.

 -- Check script 'main.nf' at line: 55 or see '/home/runner/work/methylseq/methylseq/.nf-test/tests/bd398dfb432492c55351d70617e5f74d/meta/nextflow.log' file for more details
Nextflow stderr:

Check failure on line 1 in Bwameth Single-End With Index

See this annotation in the file changed.

@github-actions github-actions / JUnit Test Report

Bwameth Single-End With Index 

Assertion failed: 

assert workflow.success
       |        |
       workflow false
Raw output 
Nextflow stdout:

ERROR ~ BUG! exception in phase 'semantic analysis' in source unit 'Script_ec4b4a6a81036f9f' The lookup for WorkflowMethylseq caused a failed compilation. There should not have been any compilation from this call.

 -- Check script 'main.nf' at line: 55 or see '/home/runner/work/methylseq/methylseq/.nf-test/tests/51c875c2bf7496f4876c6ae86a914502/meta/nextflow.log' file for more details
Nextflow stderr:

Check failure on line 1 in Bwameth Single-End RRBS

See this annotation in the file changed.

@github-actions github-actions / JUnit Test Report

Bwameth Single-End RRBS 

Assertion failed: 

7 of 7 assertions failed
Raw output 
Nextflow stdout:

ERROR ~ BUG! exception in phase 'semantic analysis' in source unit 'Script_ec4b4a6a81036f9f' The lookup for WorkflowMethylseq caused a failed compilation. There should not have been any compilation from this call.

 -- Check script 'main.nf' at line: 55 or see '/home/runner/work/methylseq/methylseq/.nf-test/tests/56cd926fa0dc7dd400778fbe4a1ce68/meta/nextflow.log' file for more details
Nextflow stderr:

Check failure on line 1 in Bwameth Single End RRBS With Index

See this annotation in the file changed.

@github-actions github-actions / JUnit Test Report

Bwameth Single End RRBS With Index 

Assertion failed: 

assert workflow.success
       |        |
       workflow false
Raw output 
Nextflow stdout:

ERROR ~ BUG! exception in phase 'semantic analysis' in source unit 'Script_ec4b4a6a81036f9f' The lookup for WorkflowMethylseq caused a failed compilation. There should not have been any compilation from this call.

 -- Check script 'main.nf' at line: 55 or see '/home/runner/work/methylseq/methylseq/.nf-test/tests/3aea604a94402b3eb94326cc95541bc9/meta/nextflow.log' file for more details
Nextflow stderr:
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