Citationtools #874
6 tests run, 0 passed, 0 skipped, 6 failed.
Annotations
Check failure on line 1 in Bismark Single-End
github-actions / JUnit Test Report
Bismark Single-End
java.nio.file.NoSuchFileException: /home/runner/work/methylseq/methylseq/.nf-test/tests/76e3f1e3d670957ab6a1a2e6f3042831/output/bismark/reference_genome/BismarkIndex
Raw output
Nextflow stdout:
ERROR ~ BUG! exception in phase 'semantic analysis' in source unit 'Script_ec4b4a6a81036f9f' The lookup for WorkflowMethylseq caused a failed compilation. There should not have been any compilation from this call.
-- Check script 'main.nf' at line: 55 or see '/home/runner/work/methylseq/methylseq/.nf-test/tests/76e3f1e3d670957ab6a1a2e6f3042831/meta/nextflow.log' file for more details
Nextflow stderr:
Check failure on line 1 in Bismark Single-End With Index
github-actions / JUnit Test Report
Bismark Single-End With Index
Assertion failed:
assert workflow.success
| |
workflow falseRaw output
Nextflow stdout:
ERROR ~ BUG! exception in phase 'semantic analysis' in source unit 'Script_ec4b4a6a81036f9f' The lookup for WorkflowMethylseq caused a failed compilation. There should not have been any compilation from this call.
-- Check script 'main.nf' at line: 55 or see '/home/runner/work/methylseq/methylseq/.nf-test/tests/ff6977f1b99f461430ba23061eef49ac/meta/nextflow.log' file for more details
Nextflow stderr:
Check failure on line 1 in Bismark Single-End With RRBS
github-actions / JUnit Test Report
Bismark Single-End With RRBS
Assertion failed:
13 of 13 assertions failed
Raw output
Nextflow stdout:
ERROR ~ BUG! exception in phase 'semantic analysis' in source unit 'Script_ec4b4a6a81036f9f' The lookup for WorkflowMethylseq caused a failed compilation. There should not have been any compilation from this call.
-- Check script 'main.nf' at line: 55 or see '/home/runner/work/methylseq/methylseq/.nf-test/tests/a69777e6b941ade0d125e262de48857a/meta/nextflow.log' file for more details
Nextflow stderr:
Check failure on line 1 in Bismark Single-End With RRBS With Index
github-actions / JUnit Test Report
Bismark Single-End With RRBS With Index
Assertion failed:
assert workflow.success
| |
workflow falseRaw output
Nextflow stdout:
ERROR ~ BUG! exception in phase 'semantic analysis' in source unit 'Script_ec4b4a6a81036f9f' The lookup for WorkflowMethylseq caused a failed compilation. There should not have been any compilation from this call.
-- Check script 'main.nf' at line: 55 or see '/home/runner/work/methylseq/methylseq/.nf-test/tests/cebda300f8654753972612bb5384e269/meta/nextflow.log' file for more details
Nextflow stderr:
Check failure on line 1 in Bismark Single-End NOMe-seq
github-actions / JUnit Test Report
Bismark Single-End NOMe-seq
Assertion failed:
16 of 16 assertions failed
Raw output
Nextflow stdout:
ERROR ~ BUG! exception in phase 'semantic analysis' in source unit 'Script_ec4b4a6a81036f9f' The lookup for WorkflowMethylseq caused a failed compilation. There should not have been any compilation from this call.
-- Check script 'main.nf' at line: 55 or see '/home/runner/work/methylseq/methylseq/.nf-test/tests/cb15b9903393249a0c6b53ee8d553134/meta/nextflow.log' file for more details
Nextflow stderr:
Check failure on line 1 in Bismark Clip R1 - 2
github-actions / JUnit Test Report
Bismark Clip R1 - 2
Assertion failed:
16 of 16 assertions failed
Raw output
Nextflow stdout:
ERROR ~ BUG! exception in phase 'semantic analysis' in source unit 'Script_ec4b4a6a81036f9f' The lookup for WorkflowMethylseq caused a failed compilation. There should not have been any compilation from this call.
-- Check script 'main.nf' at line: 55 or see '/home/runner/work/methylseq/methylseq/.nf-test/tests/5ee9e84a8106e83d2fc48991883b581d/meta/nextflow.log' file for more details
Nextflow stderr: