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64 Open 230 Closed
64 Open 230 Closed
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Issues list

Can't locate Bio/SeqIO.pm in @INC
#300 opened May 10, 2023 by claramicro
Gubbins
#299 opened Apr 17, 2023 by Skiucabe1
Custom abricate db
#298 opened Aug 1, 2022 by Dangoh
start with assembled genomes / cgMLST
#297 opened May 19, 2022 by shlomobl
1
Error can not read sequence
#296 opened Apr 26, 2022 by akarkaba
Centrifuge Issue on Install
#293 opened Nov 5, 2021 by peflanag
make: *** [3960_Saga/sketch.msh] Error 127
#292 opened Nov 3, 2021 by naikd0
error running nullarbor skesa
#288 opened Jun 16, 2021 by BettyAC
3
nullarbor --check doesn't see version of shovill although shovill is installed
#285 opened Feb 3, 2021 by katerinka-arh
no roary and report
#284 opened Dec 15, 2020 by balsa012
1
File names
#283 opened Nov 19, 2020 by Dangoh
Error installing NULLARBOR
#281 opened Oct 28, 2020 by acgonzalezz
3
Set tmp folder?
#280 opened Oct 22, 2020 by petroslad
Perl v.5.26.0 vs v.5.24.0?
#279 opened Oct 20, 2020 by Michael-Sikorski
centrifuge database problem
#275 opened Aug 2, 2020 by abdeljalil-senhaji
1
MakeFile:154: ref.fa.fai error 1 help wanted
#272 opened Jun 18, 2020 by peflanag
@tseemann
2
Nullarbor fails at MLST step
#271 opened Jun 18, 2020 by mdiricks
Deleted isolates still present in MLST table bug
#268 opened Jun 11, 2020 by pydupont
@tseemann
1
Query: Mixed sample - separate reads? help wanted
#267 opened Jun 3, 2020 by peflanag
@tseemann
2
Query: Plasmid Annotation
#266 opened Apr 22, 2020 by dan-hud
Suggestion: Improved error messages for bad fastqs that cause problems enhancement
#265 opened Apr 6, 2020 by morganx
@tseemann
1
ERROR: Could not find .aligned.fa/.vcf in 'file' make: *** [Makefile:108: core.aln] Error 2 help wanted
#264 opened Apr 6, 2020 by sharbie88
@tseemann
2
minikraken2 database link needs to be updated bug
#263 opened Mar 31, 2020 by ramay
@tseemann
Error - report not written and empty samples help wanted
#262 opened Mar 12, 2020 by tristanpwdennis
@tseemann
1
Conda install and software versions
#261 opened Mar 11, 2020 by hmontenegro
9
ProTip! Find all open issues with in progress development work with linked:pr.